Cucurbita pepo subsp. pepo (vegetable marrow): 111790702
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Entry
111790702 CDS
T05351
Name
(RefSeq) nuclear pore complex protein NUP93A-like isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111790702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111790702
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111790702
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
TPR_14
TPR_2
TPR_12
TPR_1
TPR_8
Motif
Other DBs
NCBI-GeneID:
111790702
NCBI-ProteinID:
XP_023527489
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Position
LG03:complement(2776571..2790757)
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AA seq
863 aa
AA seq
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MANDQDMSGWTDLLHSSTKLLEQAAPSAQFPPLQRNLDQLEVLSKKLKAKTLRTEAPTQS
IAATRLLAREGINAEQLARDLKSFELKTTFEDVFPAEATSIEEYLQQVHEMAMISAIQEA
QKDNVRSFNGYMMKVLEEDWKKEKRDFLQSLSRISTLPRTNMIDDNSGAPRSGQIASFVS
SPHVSSGFPTLESVSLANKPTMEKKASTYAEVVKKMNDARERGLPFKPAVAFKGAYESLD
LHGSAGKSVNMQKIWHLIQTLMGEDSTPKQNVSKTMSLILGARRHLELGHEKYMMDTIQS
HPAQAALGGVVGNLQRVRAFXQIRLRDYGVLDFDANDARRQPPVDTTWQQIYFCLRTGYY
DEARNITLSSRASNQFAPLLTEWINTGGMVPAEIASVASEECEKLLRMGDRMGRAAYDKK
KLLLYAIISGSRRHIDRLLRDLPTLFNTIEDFLWFQLSAVRNSHGESSSIVLNEGSVPYT
LDDLQFYLNKFEPSYYTKNGKDPLVYPYVLLLSIQLLPAVLYLSKETGEEGLNIDAAHIS
IVLADHGVLSEGSGAGQKLGVMDAYAEVSSIIRQYGSLYLRMGNLSMALEYYAQAAAAVG
GGQLAWSSRGSVDQQRQRTLMLKQLLTELLLRDGGIYLLLGARGAGEEGELVRFMTDIKS
RQQFLLEAARQCQEAGLYDKSIEIHKRVGAFSMALDTINRCLSEAICALSRGRLDGESRT
AGLIHSGNDILETYKYYPEISLQEREYVMEQQTVLRQLEAVLSIHKLARLGHHLDALREI
ARIPFLPLDPRGPDMTSDVFQNLSPHIQGCVPDLLKIALTCLDNVKDSDGSLRALRAKIA
NFVANNLNRNWPHDLYEKVAQTL
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgaccaagacatgagtggctggactgatctgcttcactcttctacgaagctc
ctcgaacaagctgctccatcagcgcagttccctcctctccagaggaacttagatcagttg
gaagtgttatctaaaaaactcaaggcaaagaccttgagaactgaggcgcctactcaatct
attgctgctacaaggttacttgctcgtgagggaataaatgcggagcaacttgctcgagat
ttgaagtcttttgaactaaagactacttttgaggacgtatttcctgcggaggcaactagt
attgaagaatacttgcaacaggtccatgaaatggcaatgatctcggccatacaggaggcg
cagaaggacaatgtcagaagttttaatggttacatgatgaaagttttagaggaggattgg
aaaaaggaaaaacgtgatttccttcagagtttaagccgaatatctacattacccaggact
aatatgattgatgataatagtggggctccaaggtcgggtcaaattgcctcctttgtatcc
agtcctcatgtttcatctggttttcccactctggagtctgtatctctagccaacaagcct
actatggagaaaaaagcatcaacatatgctgaagtagtgaagaagatgaacgatgccagg
gaacgtggattaccatttaaacctgctgtagctttcaaaggcgcttatgaaagtttagat
ctccatggatctgctgggaagtcagttaacatgcaaaagatttggcatcttattcaaaca
ttaatgggtgaggactcaactccaaaacaaaatgtttcaaaaacaatgtcactaatactt
ggggccaggcgccatctagagttgggacacgagaaatatatgatggatacaatacaaagc
catcctgcacaggctgcccttggtggtgtcgttggaaatcttcaaagagttcgggccttc
nttcagattcgcttgagagactatggagttctagattttgatgccaatgatgcacgtaga
cagcctcctgttgatactacttggcaacagatttacttctgcttgagaactggatattac
gacgaggccagaaacattacactgtcgtctcgtgcatcaaatcagtttgctcctctgctt
acagaatggattaatactgggggtatggtaccagcagagatcgcaagtgttgcatcagaa
gaatgtgagaagttgttaagaatgggagataggatgggccgagctgcatatgataagaaa
aagttgttgttatatgctattatttcaggttctcgccggcatattgaccgtttgttgaga
gatcttccaacgctctttaatacaatagaggattttctatggtttcagttgtcagctgta
cgtaacagccatggggaatcctcatctattgttctgaatgaaggctcggtaccttacact
ttggatgatttgcagttttacctcaacaaatttgaaccgtcatattatacaaaaaatggg
aaagaccccctggtatatccatatgttctgcttttaagtatccagttgctgcctgcggtc
ttgtatttgtcaaaggaaacaggagaagaaggattaaatattgatgctgcccacatatca
attgtgcttgcggaccatggagtactttcagaaggatcaggggctggacaaaaattgggt
gtgatggatgcttatgctgaggtatctagcataattaggcagtatggttctctatattta
agaatgggtaatttatctatggcattagagtactatgcccaggctgctgcagccgtgggg
ggtggacagttggcatggtctagcaggggtagtgtggatcagcagcggcagagaactttg
atgctgaagcaacttctaacagagctgttgttacgtgatggaggcatctatctcttgctt
ggtgcaagaggtgctggagaagaaggtgaattagtacgttttatgactgacattaaatca
aggcaacagtttctactggaagctgctcgacagtgtcaggaagctgggctttatgacaag
tcaatagagattcacaagagagttggggcattttcaatggcactggatacaattaatagg
tgtctctctgaagcaatctgtgcgctgtcacgtggtagattggatggggaaagccggact
gctggccttattcattcaggcaatgacattttggaaacatacaaatattatcctgaaatc
agccttcaggaaagagaatatgtcatggagcaacagaccgtgttaagacaacttgaggca
gttctttcaatccacaagttggccagattgggtcatcatctagatgctctaagggagatt
gctagaattccatttcttccattggatccacgagggcctgatatgacttctgatgtattt
caaaacttatctcctcacattcaaggctgtgtaccagatcttttgaagattgcacttacg
tgtctggacaatgtgaaagattctgatggatctcttcgtgccttgagggccaagattgca
aacttcgtagcaaataatttaaacaggaactggcctcacgatttgtatgaaaaagttgct
caaaccttgtga
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