Cucurbita pepo subsp. pepo (vegetable marrow): 111790713
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Entry
111790713 CDS
T05351
Name
(RefSeq) serine/arginine-rich SC35-like splicing factor SCL28
KO
K12900
serine/arginine-rich splicing factor 10
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111790713
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpep01009
]
111790713
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpep03041
]
111790713
Protein phosphatases and associated proteins [BR:
cpep01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111790713
Spliceosome [BR:
cpep03041
]
Common components
Common spliceosomal components
SR proteins
111790713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
111790713
NCBI-ProteinID:
XP_023527505
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All DBs
Position
LG03:complement(11239948..11244723)
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AA seq
248 aa
AA seq
DB search
MARYRSRSRSYSPRRRSRTPPRGRKRYDDDPRDRYRESRSHRDRRSPAPSGLLVRNLPLD
ARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQLNHTVIGGRE
IRIVFAEENRKTPQEMRVTSRSSGRSSRRRSPARSPRRRYHSYSRSPSPARHDSRSRGAR
DEYLSPARSRSISRSHSPRDRRDYSRSPTPKENGRSPRAVDIARSRSRSPRAASRSPSGS
RSRSFSPR
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggtaccgaagccggagcagaagttacagccctcgtcggcgtagccgaacccca
ccacgagggcggaagcggtacgacgacgaccctagagaccggtaccgcgaaagcaggtct
catagggaccgtcgctctcctgctccttctgggttactcgtgcgtaatctcccccttgat
gctaggccagaagatcttaggatcccgttcgagcgttttggtcctgttaaggatgtgtat
cttccgaaaaactactacactggggagccccgagggtttgggtttgtgaagtttcggttt
gcagaagatgcagctgaagcaaaacaacaactgaatcatacggttataggtggacgggag
atacgaattgtatttgctgaggagaacaggaaaactccacaagaaatgcgtgtgacttca
cgctcaagtggcagaagcagcagaagacgttctccagcaaggtctccgcgacggcgatat
cattcttactcacgctcaccttcacctgccaggcatgactcaaggagccgtggggccagg
gatgagtatctctctcctgcacgatctagatcaatttcacgttctcattcccctcgtgat
agaagggattacagccgatctccaactccaaaggagaatggtcggagccctcgtgcagtg
gacattgcacgcagtaggtcaaggagtccaagggctgctagccgcagtccttctggatcg
cgttcacgttcctttagtcctcgctga
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