Cucurbita pepo subsp. pepo (vegetable marrow): 111790864
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Entry
111790864 CDS
T05351
Name
(RefSeq) uncharacterized protein LOC111790864 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111790864
Membrane trafficking [BR:
cpep04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
111790864
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
111790864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_RIG_2nd
Synaptobrevin
Lgl_C
WDR55
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
111790864
NCBI-ProteinID:
XP_023527737
LinkDB
All DBs
Position
LG03:242145..251542
Genome browser
AA seq
1122 aa
AA seq
DB search
MFAKRLLQKAILHSQHAVLRGSLTPEDLDLRVTVHSGIPSTASILAFDSIQRLLAIGTLD
GRIKVIGGGGIEGLLMSPNQLPYKYLEFLQNEGYLISISNGNEIQVWNLDSRSIACCLQW
ESNITAFSIVSGSHFMYVGDENGLLSVIKFDAEDGKLLQLPYLVSATSISDVAGFPFPDV
QTSPVIGVLQHSSIGNSVLIAYASGLFLLWDVSRGQVLFVGGGKDLQMNDRLDESSSEVD
DNLPIDALENSLAEKEISALCWASSNGLILAVGYIDGDILFWKTLITASGSGQQGSPSSK
NVVRLQLSSSEKRLPVIVLHWSGNGRAPNDCEGRLFIYGGDEIGSEEVLTVLTIEWSPGM
EVLRCAGRTEIKLHGSFADMILLPSSGAAGNGPKEELFVLTNPGKLHFYDASMLSSIIDK
TDSKPLISPLEFPAMIPTSEPSMTTSKLIKLPNWGSSTKILSELALMKLSSTAIQARSAK
WPLTGGVPYQLPTMKDDKVERVYLAGYQDGSVRVWDATHPLFSFICHLDAELEGIKVAGS
SAPILKLDFCCATTSLAVGNECGLVRIYDLKGSADDKNLYFVTESRREVHSLPQGKGPHC
RAVFSLLNSPIQALQFSKGGVKLGVGYGNGRIAVLDISSSSVLFFTEGISNSSSPIITMI
WKGNFAVTHGPIRSPKHSGAKSADDCAEEPLFILTKDAKINVFDGTAGNMISLRPWHLKK
ESVAISMYVIESGISVSGSPDEKDNEESSQNPTTKSECNLGSGSAGSNLHESQHDSSAEE
TRHAEKFLDSYVLLCCEDSLRLYSVKSIIQGNNKPTRKVKQSKCCWTTTFKIKERDVGLV
LLFQSGVIEIRSLPDLELLKASSLQSILMWNFKANMDKISSSSEQGQIVLANGGEVAFLS
LLSKENEFSIPDSLPSLYDEVVAAAADAAFSVSSYQKNNQLPSTGILSSIVKGFKGGKKT
PTVNFCTSRESYCAHLEEIFLKPPFPDSSSSALKNTEEVEELTIDDIEIDDIEIDDKPPP
PASTSSKDVKEERRTDRQRLFGDGDDDWKPKTRTTEEILATYKFSGDASLAAAHARNKLL
ERQEKLEKLSKRTEDLRNGAEDFASLANELVKTMEKRKWWHI
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccaagcgattgttgcagaaggccattctccattctcagcatgctgtactgcgc
ggtagtttaactccggaggacttggatctcagagtcacggttcactctggcattccatca
accgcatcaattcttgctttcgactccatccaacggctactggccattggaacactggat
ggaagaataaaagtgatcggtggaggtggtattgaagggcttcttatgtccccaaaccaa
ttgccttacaagtacttggagtttctacagaatgagggttatttaattagcatctccaat
ggcaacgaaattcaggtctggaatcttgacagcaggtctatagcatgctgtttacagtgg
gaatcaaatataactgcattttccatcgtcagtggctcccacttcatgtatgtcggggat
gagaatggtcttctgtcagttatcaagtttgatgctgaagatggaaaacttctgcagttg
ccataccttgtttctgcaacttctatcagtgatgttgcgggatttccatttcctgatgtc
caaacctcacctgtcattggagttcttcaacattcttctattgggaacagtgttttgata
gcatatgctagtggcttgtttttactttgggatgtctcaagaggtcaagttctttttgtt
ggaggcggcaaggacctgcagatgaatgacagacttgatgaatcatcgagcgaagtggat
gataaccttccaattgatgctttggaaaatagtttagcagagaaagagataagtgctctc
tgttgggcatcctccaatggattaattcttgctgtgggatatatagatggagatatcttg
ttctggaaaacattaattaccgcttctggtagtggtcaacaaggttcgccatcatctaaa
aatgttgttagattacaattatcatcttcagagaaaagacttcctgttattgtcttgcat
tggtctggaaacggtagagcacctaatgattgtgaagggcggttattcatctatggtggc
gatgagataggatctgaagaagttttaacggttttaaccattgagtggtcacctggaatg
gaggtactgagatgtgcgggtcgtacagagatcaaactccatggctcttttgcagatatg
atcttgttgccaagttctggtgctgctgggaatggtcccaaagaagaactttttgtgctt
acaaaccctgggaaactgcacttttatgacgcaagtatgctgtcttcaataatagataaa
acagacagcaaaccactcatctctccattggagtttcctgcaatgatacctacatccgaa
ccatccatgaccacgtcaaagcttattaagttgcccaattggggatcctcgacaaagatt
ttatctgagctagcattgatgaagcttagttcaacagcaattcaagctcgtagtgcaaag
tggccattgactggaggagtgccctatcagttaccgacaatgaaagatgataaggttgag
agggtatacctagcaggttatcaagatggttctgtacgcgtttgggatgcaactcatcct
ttattttcttttatatgccatttagatgctgagttggaaggtataaaggttgctggttca
agtgctcctatattaaaattggacttctgctgtgctactacttctttagctgttggcaat
gaatgtggtctggtgcggatttatgaccttaaaggcagtgctgatgacaaaaatttatac
tttgttaccgaatccagacgtgaagttcatagtctgcctcaaggcaaaggacctcattgt
agagctgtcttttctctcctaaattccccaattcaagcattgcagttttctaagggtgga
gttaaacttggtgtggggtatggaaatggtcgtattgcagtgctcgacatttcttcatca
tcggttttattctttacggagggcatatctaactcaagctcccccattatcacaatgatt
tggaaaggaaattttgctgtaactcatggccctataaggagccccaagcactcaggggct
aaatctgcagatgattgtgctgaagaaccgttgtttatattaaccaaagatgcaaagatc
aatgtttttgatggtactgccggaaacatgatcagccttcggccgtggcacttgaaaaag
gaatctgttgcgatttcaatgtatgttatagagagtggtatttctgtctctggatctcct
gatgaaaaggataatgaggagtcatcccaaaatcctactaccaaaagtgaatgtaatcta
ggcagtggttctgctggatcaaatttgcacgaatcccaacatgattcttctgcagaagaa
acacgccatgccgaaaagtttcttgattcatatgttctactttgttgtgaggattcattg
cgcttatactcggtcaaatccataattcagggaaataataaacctactcgtaaagtgaag
cagtcaaaatgttgttggactactacttttaaaatcaaagaaagagatgtcggattagta
ttgttgtttcagtctggtgttattgaaataagatcgttgccagatttagagttgctgaaa
gcaagctccctccaatcgattctaatgtggaactttaaggcaaacatggacaagatttca
agttcttctgaacaagggcagatagtgctggccaacgggggcgaggtagcttttctctct
ctgttatccaaggaaaatgagttcagtattcctgactccttgcctagtctctatgatgaa
gttgttgctgctgctgccgatgctgcttttagtgtttcatcttatcagaagaacaatcag
cttccgtcaacggggatattaagtagcattgtcaaaggctttaaaggcgggaaaaagacc
cctaccgtaaatttttgcacttcccgtgaatcttattgtgctcatttggaggaaatattt
ctgaagcctccgttcccagattcatcatcctcagctcttaagaataccgaggaagttgag
gaactcacaatagatgatattgaaatagatgatattgaaatagacgacaaaccaccacca
ccagcatctacttcatccaaggatgttaaagaggagaggagaacagataggcaaagattg
tttggagatggggatgatgattggaagcctaaaactagaacaactgaagaaattttagcc
acatacaaattttccggggatgcttcgttggctgctgcacatgcgagaaacaaactctta
gagaggcaagaaaaattagagaaactgagtaagcgcacagaagatttgcgaaatggcgca
gaagactttgcgtcattagcaaatgaacttgtgaagacgatggaaaagcggaaatggtgg
catatatga
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