Cucurbita pepo subsp. pepo (vegetable marrow): 111791123
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Entry
111791123 CDS
T05351
Name
(RefSeq) LOW QUALITY PROTEIN: valine--tRNA ligase, chloroplastic/mitochondrial 2
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
111791123
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cpep01007
]
111791123
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpep03016
]
111791123
Enzymes [BR:
cpep01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
111791123
Amino acid related enzymes [BR:
cpep01007
]
Aminoacyl-tRNA synthetase
Class I (U)
111791123
Transfer RNA biogenesis [BR:
cpep03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
111791123
Prokaryotic type
111791123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
111791123
NCBI-ProteinID:
XP_023528105
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All DBs
Position
LG03:4293057..4310109
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AA seq
969 aa
AA seq
DB search
MLLQMAFSGPSLLHPSSAYRLNPLIFTKRRRSFGLSRFHFRRLQQRQLAVAASANGVFTS
PEIAKTFDFASEERIYRWWESQGYFRPHFDQDSVPFVISMPPPNVTGSLHMGHAMFVTLE
DIMVRYNRMKGRPTLWLPGTDHAGIATQLVVERMLASEGIKRVELGRDEFTKRVWEWKEK
YGGTITNQIKRLGASCDWTKEHFTLDDQLSRAVVEAFVRLHERGLIYQGSYMVNWSPHLQ
TAVSDLEVEYSEESGTLYHIKYRVAGGSRSDYLTVATTRPETLFGDVAIAVHPQDDRYSK
YVGMMAIVPMTYGRHVPIISDKNVDKDFGTGVLKISPGHDHNDYLLARKLGLPILNVMNK
DGTLNKVAGLYCGLDRFEARKKLWADLEETGLAVKKEAHTLRVPRSQRGGEIIEPLVSKQ
WFMTMEPLAEKALRAVEKGDLTIIPERFEKIYNHWLSNIKDWCISRQLWWGHRIPVWYIV
GKNPEEDYIVARNADEAHEQAHKKYGKGVEIYQDPDVLDTWFSSALWPFSTLGWPDETAE
DFKRFYPTTMLETGHDILFFWVARMVMLGIEFTGTVPFSYIYLHGLIRDSQGRKMSKTLG
NVIDPLDTIKEFGTDALRFTLALGTAGQDLNLSTERLTSNKAFTNKLWNAGKFILQNLPT
QNDSQSWKSILSYEFEKEDCLLKLPLPECWIVSELHSLIDVVTASYDKFFFGDVGRDIYN
FFWGDFADWYIEASKARLYQSGGDSVALAQAVLLYVFENILKLLHPFMPFVTEELWQALP
HRKEALIISPWPQILLPRQAGAVKKFENLKLLTKAIRNARAEYSVEPAKRISASIVASEE
VNQYISEEKEVLALLTRLDLHNVHFANAPPGNVDQSVHLVAGEGLEAYLPLADMVDISAE
LQRLSKRLTKMKTEYDGFIARLNSPSFVEKAPEDIVRGAREKADEAKEKIALTEKRLSLL
RSTVPVPDC
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgcttcttcaaatggccttttccggcccttccctcctccatccttcttctgcttacaga
ctcaatccccttatctttaccaaacgccggcgttcttttggcctctcccgcttccatttc
cgtcgtctacagcagagacaattagctgttgccgcatcagcgaatggtgtttttacttct
ccagagatagcaaagacgttcgactttgcttcggaagagcgaatatatcgatggtgggaa
tctcaaggttatttcaggccacattttgatcaagatagtgttccgtttgtgatttcaatg
ccacctcccaatgtcacaggatcactgcacatgggacatgcgatgtttgtgactcttgag
gatattatggttagatacaaccgtatgaagggcagaccgacactctggcttcccgggact
gatcatgcaggtattgccacgcagttggttgttgaaagaatgcttgcgtctgaaggaata
aaaagggttgaattgggcagagatgaatttacaaagcgagtttgggagtggaaagagaag
tatggtggaactatcactaatcaaattaagagacttggagcttcctgtgattggactaaa
gagcactttacccttgatgaccagctaagtcgagccgttgttgaggcatttgttcgactt
catgagagaggattgatctatcaagggtcttacatggtaaactggtctcctcatttgcaa
actgctgtttctgacctggaagtagagtactctgaagaatctggtactctctatcatatt
aagtatcgagtggctggaggttcaaggagcgattacttgacagtagcaacaactcgtcct
gaaacgttatttggtgatgtagctatagcagtgcatcctcaggatgatcgttattctaaa
tatgttggcatgatggcaattgttccaatgacgtatggtcgtcatgtccctatcatctct
gacaagaatgttgataaggacttcggaactggtgtgttaaagataagccctggacatgat
cataatgactatctgcttgctcgaaaacttggtctccctatacttaacgtgatgaacaag
gatggtacccttaataaggttgctgggctttactgtggtttagatcggtttgaagcacga
aaaaaactgtgggcggatttggaggagacaggcttagctgtaaaaaaggaggcacacacc
ttacgagtaccaagatcccaacgtggaggagaaataattgaacctttagtgagcaaacag
tggtttatgaccatggaaccattggctgaaaaagcccttcgtgctgttgaaaaaggagat
ttaaccattatccccgagagatttgagaagatttacaatcactggctgtcaaatattaag
gactggtgtataagcaggcagctatggtggggacatcgtataccagtttggtacattgtg
gggaaaaatccggaagaagactacatagttgctaggaatgctgatgaggctcatgagcaa
gctcacaagaaatatgggaagggtgtagaaatataccaagatccagacgtacttgacact
tggttctcaagtgcgttatggccttttagtacgcttggatggccagatgagacagctgag
gattttaagcggttctatccaacaacaatgcttgaaactgggcatgatatactattcttt
tgggtggcgaggatggtaatgctgggaattgaatttactggcactgttccattttcttat
atttatctccatggactcattcgggactctcagggacggaagatgtctaaaacactagga
aatgtgatagatccacttgatacaattaaagaatttggcactgatgctttacgattcaca
cttgctttaggaactgccggtcaggatcttaatctatccaccgagaggttgacttccaat
aaggcattcactaataaattgtggaatgctggaaagttcatattgcagaatttacctaca
cagaatgattcgcaatcttggaaatccatactgagttatgagtttgagaaagaggattgt
ctgctcaagttacctttaccagaatgctggattgtctcggaacttcattccctaatagac
gtggtcaccgctagctatgataaatttttcttcggagatgttggcagggatatatataac
tttttctggggtgatttcgcagattggtacatcgaagccagtaaagctcgcctttatcaa
tccggaggcgattccgttgctttggcacaagctgtgctgttgtatgtttttgaaaacatt
ctcaaattactacatcctttcatgccgtttgtgacagaggaactttggcaggcacttccc
catcgcaaagaagctttaatcatatctccttggccacagattttacttccaaggcaggcc
ggtgcagttaagaaatttgagaacctaaagttgttgacgaaagcgattcggaatgctaga
gcagagtattccgttgagccagcaaagcgtatatctgcttctatagttgcaagtgaagaa
gtcaatcaatatatatctgaagagaaggaagttttagctcttcttacacgattggatcta
cacaatgttcattttgcaaatgctcctccaggaaatgtagatcaatcagtgcatcttgta
gctggtgaaggactagaggcttatctacctcttgctgatatggttgatatctctgctgaa
ctccaacgtttatcgaaacgccttacgaaaatgaagacagaatatgatggatttatagct
cgcctcaattctccaagctttgtggagaaagctcccgaggatatcgtccgtggggcaaga
gaaaaggccgacgaagcaaaagagaagatagctctcaccgaaaaacgcctctctctcctc
agatcaaccgttccagttcctgattgttga
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