Cucurbita pepo subsp. pepo (vegetable marrow): 111791133
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Entry
111791133 CDS
T05351
Name
(RefSeq) sister chromatid cohesion 1 protein 3
KO
K06670
cohesin complex subunit SCC1
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpep03036
]
111791133
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
111791133
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
Motif
Other DBs
NCBI-GeneID:
111791133
NCBI-ProteinID:
XP_023528123
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Position
LG03:5638677..5642456
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AA seq
741 aa
AA seq
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MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYEKTKIPVVVDAIMFGEVPLALRTSSYLL
LGVVRIYSKQIDYLKHDVDVLVMELRKMHTQASAKLTLPENAYQAPFHSITLPETFDLDA
LELDTDIYYDGIPDTHLRSEEEITLADQISIGRDAYVAITFDEDVMLDLSHLGEDPDLGF
RPMEEDVISPPVDTTMNVEGTVGNEDILNMRLDEDNVPQSFPGVEVLDPMDVQDFGPSNQ
RMREDDNLSQNVPEIEVLREAVPDLSPRDVPMVPSLGGDHMSESHRFVDENISQENLLPI
MEDKMTLPRTSLPFEQSAGLPTSATSQEALDMIDTHISFRQSPEELVLQPTPPQPPRPRS
RKRKQFFDKSTVLTNKFMKKALEDTSDLLRERRNTPSSSLEVWKFNNRLRKEDVFYHPHV
TGLCHDLCGIFHVNYIAKKCRATSLEEAFGDLGDARNIASTSETFLGQADAPSPAPEAVS
PPHSGIPPSVDPAINIASAGEIFSPLVPPAPSPAREAAPSPHSRIPSTVDPASASSPGVE
IEHLRDVEGNRGDDTLADLIASPTRFMPSPRPSEGLGSPSVMIGSTGMLSTPGQASTEPS
RSMFETPGTMDEGLGAEDITLSDIPEQRSPADEDLYFLEADSSPAGRSRSQGTQGVDSLS
VRTRAVGRYLRSLSPIKSISDDSTQELSLNDILEGKRRKLSARMFYETLVLKSYGLIDVQ
QDEPYGDIRLKLTPKLSMAQI
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgttttactcgcacacgctgttggctcgaaagacgccattggggactgtgtggtgtgct
gctcatttgcagcaccgtctcaacaagaaagactacgagaagactaaaattcctgtcgtc
gtcgatgccattatgtttggtgaagtaccgcttgccctgcggacgtcgagctaccttctg
ttaggtgttgtgcggatttattcaaagcaaatcgactatttaaaacatgatgttgatgtt
ttagtgatggagttacgaaaaatgcatacgcaagcttcggcgaaactcactttgcctgag
aatgcttatcaggcaccgtttcattctatcactttgcctgagacttttgatcttgatgct
ctggaattggacactgatatttattacgatgggattccagatactcatctcaggagtgag
gaagagatcactctagcagatcaaatttctattggaagagatgcttatgttgctataact
ttcgacgaggacgttatgctggatttatcacatcttggagaggatcctgatttgggtttc
aggccaatggaagaggacgtgatctctcctcccgtggatactactatgaacgttgaaggc
acagtcggtaatgaagatatacttaacatgagacttgatgaggacaacgtgccacaaagt
tttccaggagtagaagttttggatcctatggatgttcaagattttggtccaagtaatcag
agaatgcgtgaagatgataacttgtcacaaaatgttccagaaattgaagttctgcgagag
gcggtccctgatttaagtccaagagatgttcctatggtgccttcactaggtggtgatcac
atgtctgaatcacaccgttttgtagatgagaatataagtcaggaaaatctcttaccaatc
atggaagataagatgactcttccaagaacatcattaccatttgagcaaagtgcaggactt
ccaacttctgctacttcgcaagaggcacttgatatgatcgatacacatatttcatttaga
caatctcctgaggaacttgttcttcaacccactcctccacaaccgccaaggccaagatca
agaaagagaaaacagttctttgacaagtctactgtattgactaacaagtttatgaaaaag
gctctcgaagatactagtgatttgttgcgtgagaggaggaacactccaagctcttctttg
gaggtatggaagttcaacaacaggttgagaaaagaagacgttttctatcatcctcacgtc
actggtctttgtcatgatctatgtggtatttttcatgtgaactacattgctaagaaatgt
cgtgcaacatccttggaggaagctttcggggatcttggggatgcgagaaacattgcttcg
acgagtgaaactttcttaggccaagcagatgctccatctccagctccagaagctgtttct
cctccacattctggaattccaccctctgttgatcctgctataaacattgcttcagcaggt
gaaattttttcgccccttgtaccacctgccccatctccagctcgagaagctgctccctca
ccacattctagaattccatccactgtcgatcctgcttctgcttcctctcctggagtggag
attgaacatctccgtgatgttgagggcaatcggggggacgataccttggcagatttaatt
gcttctccaacaaggttcatgccttctcctaggccttctgaaggcttaggttcaccatca
gtaatgattggatctactggaatgctgtcaacacctggacaagcatcaactgaaccttca
agatccatgtttgaaactcccggaacaatggacgagggactgggtgcagaagatattaca
ctctcggatattccggaacagagaagtcctgcagacgaggatctttatttcctggaagca
gatagctcaccagctggtagatcaaggtctcagggaactcaaggtgtcgactcattgtcc
gtgagaacgagggctgtaggtcggtatctaaggagtctttctcctataaaatcaatctca
gatgactcaacccaagaactctctttgaatgacattctagaaggaaaaagaagaaagcta
agcgcacggatgttctacgagacactggttttgaagagctatggacttattgatgtacaa
caagatgaaccttatggggacatccgtttgaaattgactccaaagctttctatggctcaa
atatag
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