KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111791301
Entry
111791301         CDS       T05351                                 
Name
(RefSeq) protein LST8 homolog
  KO
K08266  target of rapamycin complex subunit LST8
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04136  Autophagy - other
cpep04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    111791301
   04136 Autophagy - other
    111791301
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cpep04131]
    111791301
Membrane trafficking [BR:cpep04131]
 Autophagy
  Other autophagy associated proteins
   mTORC1 complex
    111791301
   mTORC2 complex
    111791301
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40 WD40_Prp19 Beta-prop_IFT122_1st WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd WDR55 WD40_Gbeta Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st DSE1_N Beta-prop_WDR75_1st Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_NOL10_N Beta-prop_WDR41 CFAP251_N Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_IFT140_1st ASA1 NBCH_WD40 Beta-prop_HPS5 Beta-prop_Nup120_160 Beta-prop_RIG_2nd Beta-prop_Vps41 WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_Aladin Beta-prop_VPS8 Beta-prop_IFT140_2nd Beta-prop_IP5PC_F Beta-prop_WDR19_1st Beta-prop_NWD2_C Beta-prop_DCAF12 Beta-prop_SCAP Beta-prop_SPT8 PAC11 Beta-prop_NUP159_NUP214 Nucleoporin_N PROPPIN Beta-prop_WDR35_TULP_N CFAP43_N Beta-prop_WDR19_2nd DmsR_N
Other DBs
NCBI-GeneID: 111791301
NCBI-ProteinID: XP_023528357
LinkDB
Position
LG03
AA seq 316 aa
MTQPSVILATASYDHTIRFWEAKSGRCYRTIQYPDSQVNRLEITPDKRYLAAAGNPHIRL
FDINSNSPQPIMSYDSHTNNVMSVGFQCDGNWMYSGSEDGTVKIWDLRAPGCQREYESRA
AVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAA
NNHGTCYVWRLLRGTQTMTNFEPLHKLQAHKGYILKCLLSPEFCEPHRYLATASSDSTVK
IWNVDGFTLEKTLIGHQRWVWDCVFSVDGAYLITASSDTTARLWSMSTGKEMKVYQGHHK
ATICCALHDGAEPSSS
NT seq 951 nt   +upstreamnt  +downstreamnt
atgactcaaccatcagtgatacttgcaactgctagctatgatcacactattaggttttgg
gaggccaaaagcggtcgctgttaccgaactatacaataccccgattctcaagttaataga
ctggagattaccccagacaaaagatatttggctgctgctggtaatcctcacatccgattg
tttgatatcaattcaaatagccctcaaccgataatgagttatgattcacatactaataat
gtaatgtcagtggggtttcaatgtgatgggaactggatgtattcaggttccgaggacggc
acagtaaaaatatgggacttgagggctcctggttgtcagagggaatatgaaagtcgtgca
gcagttaacactgttgttctacatcctaatcagactgaactgatatctggagatcaaaat
gggaatatccgtgtatgggatttgactgcaaattcatgcagttgtgaactggtgccagaa
gtggatacagctgtaagatctttgacggttatgtgggatggaagcttggtagttgcagca
aataatcatggcacatgttatgtttggcgcttattacgtggcacccagacgatgacaaac
ttcgagccacttcataaacttcaagcacacaagggatacattctcaagtgtctcctttca
cctgaattctgtgaaccccaccgataccttgccactgcatcttctgacagcactgtcaaa
atctggaacgtggacggtttcacgttagaaaagacacttataggacaccaacgctgggtg
tgggactgcgtcttctcagtagatggtgcatatcttataacagcctcttccgatactact
gcaagactctggtccatgtcaactggcaaagagatgaaggtttatcaaggtcatcataaa
gcaactatttgttgtgccctacacgatggagctgaaccctcctctagttga

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