Cucurbita pepo subsp. pepo (vegetable marrow): 111791448
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Entry
111791448 CDS
T05351
Name
(RefSeq) TATA-binding protein-associated factor BTAF1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpep03021
]
111791448
Transcription machinery [BR:
cpep03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
111791448
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
TOR1L1_N
HEAT_ECM29
HEAT_EZ
HEAT_GCN1
TPR_Trm732_C
HEAT_GCN1_C
HEAT_2
HEAT_GCN1_C_2
HEAT_MROH2B_C
TPR_TNPO3_IPO13_3rd
mTOR_dom
RIX1
Motif
Other DBs
NCBI-GeneID:
111791448
NCBI-ProteinID:
XP_023528568
LinkDB
All DBs
Position
LG03:4371887..4393978
Genome browser
AA seq
2053 aa
AA seq
DB search
MAQQSSRLHRLLTLLDTGSTQATRFTAARQLGEIAKSHPQDLTSLLKKVSQYLRSKNWDT
RVAAAHAIGAIAQNVKHTSVSELIDCVGLKISEAGLSGTIEDVLAMPDLQSAFKSFDMNN
VLEFGALVASGGQEFDVTSENIKSPKERLARQKQNLRRRLGLDVCEQFMDVSDMIRDEDL
ILDKVNMHGNGGDRQMYPSNSIHNIQQFVANMAPYIVSKRPSARERNLLKRKAKINSKDQ
TKHWSEEGETDVAGTQLVETPRGSGPDLLSSQKAAVSVNNDDDFGDHDGDGQWPFHNFVE
QLLLDMFDSNWEVRHGSVMALREILTHQGGCAGVPLPDLVVDSSPLTTLEDGSMPNKLKR
ERDIDLNMQLTEDEFEFKLKRPKFEDALCPPANLMVCAHEDIKLGISVKVENDDRPLPDD
QSEAQFNVCSVKVEDHPNGSYYLHKDTSEAAAEECPDNKLPSEGTTMLTNFSENHELRNL
VKLTRHSWLKNFEFLQDCAIRLLCILLLDRFGDYVSDQVVAPVRETCAQALGAVFKYMHP
SLVNETLNILLQMQFRQEWEVRHGSLLGIKYLVAVRKELLHDLLSRILPACKAGLEDPDD
DVQAVAADALIPAASSIVSLKGQTLHLIVMLLWDILLDLDDLSPSTSSVMNLLAEIYSQK
EMIPKMFEALTLRETQEFDLNGAIHVHDPPEGIRSQENPYAFASLAPRLWPFMRHSITSV
RYSAIRTLERLLEAGLKQIISVPSTSIWPTTILGDTLRIVFQNLLLESNDDILECSERVW
RLLLQSQVKELELVARSYVSSWLELATTSYGSAFDSSKLFWPVALPRRSHFRAAAKMRAV
KLENESSSGVGMELAKVTISHERNGDSSSSFSKIIVGADADISVTHTRVVTATALGIFAS
KLNEGSLQDVIGPLWNAFKSSSGVQRQVASIVLISWFKEIRNQEKNSLDHGVISWLPNYL
RERLLDLLTCSDPAFPTKDSLLPYSELSRTYSKMRGEATQLVRAIESSGMLKEFFSGNQI
DLENLTADEAINFASKIPTPLGDIDGNGLEGRQGIDDIESLKQRLLTTSGYLKCVQGNLH
ISVSAMVAAAVVWMSELPTRLNPIILPLMASIKREQEEILQQKAADALAELICQCVLRKP
GPNDKLIKNICTLTCMDASETPQAAVICSMEVIDEQDILSSGTSTRKSRTKVHTLSGTDD
RSRIEGFISRRGSELVLRCLCEKLGDALFGKLPKLWDCLTEILLPTTTENVTAEDEQKIM
HTIESVKDPQTLINNIQVVRSIAPMLNEKLKPRLLTLLPCIFGCIRHSHVAVRLAASRCI
TSMAKSLTIDVMGAVIQNAIPMLEDMNSVNSRQGAGMLISLLVQGMGVELVSYAPLLVVP
LLRCMSDCDQSVRRSVTHSFAALVPLLPLARGLPPPVGLSEAFSKNKEDAQFLEQLLDNS
HIEDYKLCTELKMTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVACDIVE
RLTLNNKEDIPPSLIICPSTLVGHWAFEIEKYVDVSILSTLQYVGSVQERASLRDCFNKY
NVIITSYDVVRKDVEYLSQFHWNYCILDEGHIIRNAKSKITLAVKQLRSQNRLVLSGTPI
QNNVMDLWSLFDFLMPGFLGTERQFQSTYGKPLLAARDSKCSARDAEAGALAMEALHKQV
MPFLLRRTKDEVLSDLPEKIIQDRYCDLSPVQLKLYERFSGSHVRQEISSIVKSNESDVP
QESSVSTKASSHIFQALQYLLKLCSHPLLVTGEKMTDSMKCLLTELIPDCSDLVSELHKL
YHSPKLVALREILEECGIGVDTLSSDGAGSFGQHRVLIFAQHKALLDIIERDLFHAHMKN
VTYLRLDGSVEPEKRFDIVKAFNSDPTIDALLLTTHVGGLGLNLTSADTLVFMEHDWNPM
RDHQAMDRAHRLGQRKVVNVHRLIMRGTVEEKVMSLQKFKVSVANAVINSENASMKTMNT
DQLLDLFTSAETSRKGATSTSSKQSDENFDGEVKAMGGKKGLKAILGGLEELWDQSQYTE
EYSLSQFLAKLNG
NT seq
6162 nt
NT seq
+upstream
nt +downstream
nt
atggcacagcagtcgtctcgacttcatcgtcttcttactctcttggacactggttcaaca
caagcaacgagatttactgcagctcggcagttgggggagattgcaaaatcccatcctcag
gacttgacatctcttttgaaaaaggtatctcagtatttacgcagtaaaaattgggataca
cgggttgctgctgcccatgcgattggggctattgcacagaatgttaagcacacatctgtg
tctgagctcattgactgtgttggactaaagatttcagaggctggcttgtctggtactatc
gaggatgtcctggccatgcctgatttgcagtctgcatttaaaagttttgatatgaataat
gtgcttgaatttggcgccttggtggcatctggaggacaggagtttgatgtcaccagtgaa
aacatcaagagcccaaaggagcggttggctcgtcaaaagcaaaatcttcgtcgtcgttta
ggtttggatgtgtgtgagcaattcatggatgtcagtgacatgataagagatgaggacctt
atcttggacaaagttaacatgcatggtaatggtggagacaggcagatgtatccatcgaac
tcaatacataatatccaacagttcgttgctaacatggccccgtatattgtatccaaaagg
cccagtgctcgggaaaggaaccttctgaaacgaaaagcaaaaataaactcgaaggaccag
acaaaacactggtctgaggaaggagagacagatgtagcaggcacccaactagtggaaaca
ccaaggggctcaggtccggacttattaagttcacaaaaggcagctgtgagtgtaaataat
gacgatgattttggtgatcatgatggtgatggacaatggcctttccataattttgttgag
caacttcttcttgatatgtttgattcgaattgggaagttcgtcatggtagtgtgatggcc
ctgagagaaatcttaactcatcaaggaggttgtgctggagtaccattgcctgatttggtc
gtggacagttctccattgaccacgttagaagatggaagtatgccaaataagctaaagcga
gaaagggacattgatttaaatatgcaattgacggaggatgaatttgagttcaaattgaaa
agaccaaagtttgaagacgccttatgtccacctgccaatctgatggtttgtgcccacgag
gatattaaattggggataagtgtgaaggttgaaaatgatgataggcctttgcctgatgat
cagtctgaagctcaatttaatgtttgctctgtaaaggtggaggatcatcccaatggttca
tattatttgcataaagatacatctgaagcagcagccgaggagtgccctgataataaatta
ccttcagagggtactactatgctcacaaacttttctgaaaatcacgagctgaggaatttg
gttaaattgactaggcattcttggctgaagaattttgagtttcttcaagactgtgcgatt
cgtctgttgtgtatattacttctcgatcgttttggagattatgtatcagatcaagtcgta
gcccctgtgcgtgaaacctgcgctcaagcattgggtgcagtgttcaagtacatgcatcct
tcactagttaatgaaacgctaaatatcttgctgcaaatgcagttcagacaggaatgggaa
gttcgtcatgggagtcttttaggcataaagtatttggttgctgtacggaaggaacttctt
catgatttgctttcacgcattctccctgcatgtaaagcagggcttgaggacccagatgat
gacgttcaggcagttgcagctgatgctttaattccggctgcttcttctattgtttctctc
aagggtcagaccttgcatttaattgtgatgctgctctgggacatcctgcttgatttggat
gatctaagtccatccaccagcagtgtaatgaatctattggcagaaatctattcccagaaa
gagatgattccaaagatgtttgaggcgttaactttaagagagacccaagagtttgatcta
aatggagctattcatgtgcatgatcccccagaaggaatacgttcgcaggaaaatccatat
gcattcgcatcattggcgccgagattatggccatttatgaggcacagtatcacatcagtt
cgttattcagctatccgcactttggaacggttgctagaagcaggattgaaacaaataatt
tctgtgccttctacttccatttggccgacaaccattttaggtgacacccttaggattgtg
tttcagaatttgcttctagaatcaaatgatgatattttggagtgctcagagcgagtttgg
aggctcctcctccagtctcaagtgaaggaattggaacttgtggcaaggtcatatgtttca
tcctggttggagcttgcaacaacttcatatggttctgcatttgacagttcaaaattattt
tggccggtagcgcttcctagaagaagtcattttagggctgctgctaaaatgagagctgta
aaacttgaaaatgagtcttccagcggagttggcatggagttggcaaaggtaactatttca
catgaaagaaatggagattcttcgtccagtttttctaagatcattgtcggtgctgatgcg
gatatctcagtgactcatacccgagttgtcactgcaacagccttgggaatttttgcttct
aagctgaatgagggatctttgcaagatgtaattggtccattatggaatgcttttaaatcc
tcatctggagtccagcggcaggtagcctccattgtccttatttcttggttcaaagagata
aggaaccaagagaagaactctctagatcatggagttatttcttggctgcccaattattta
agagaaaggttgttggatctattaacgtgctctgatcctgcatttcctacgaaggattca
ctacttccttactctgaactttcaaggacatattctaagatgcgtggcgaggctacacaa
ttagtacgggccatcgagtcatctgggatgttgaaggaattcttttcgggtaaccagatt
gacttggagaacctgactgctgatgaagcaattaattttgcttcgaaaattccaacaccc
cttggagatattgatggaaatgggttggagggcaggcagggtattgatgatatagagtca
ttgaaacaacgtcttttgacaacttcagggtatttgaagtgtgttcagggtaatttgcat
atctcggtctctgcaatggttgctgctgcagttgtttggatgtctgagcttccaaccaga
cttaatccaattattttgcctttgatggcttccataaaaagagagcaggaggaaatacta
caacaaaaagcagcagacgcactagcagagttaatttgtcagtgtgttctacgtaaacct
gggccaaatgataagttgataaaaaatatttgtactttgacctgcatggacgcttctgaa
acacctcaagctgcagttatttgctccatggaggtaattgatgagcaagatattctttct
tctgggactagtacgagaaaatcaagaacaaaagttcatacactgtctggtaccgatgat
cgatcaagaattgagggttttattagcagacgtggttctgaacttgttttaaggtgtctc
tgtgagaagcttggggatgcattatttgggaagcttccgaagctttgggattgtcttaca
gaaatattgttgcctactactactgaaaatgttactgctgaagatgaacagaaaataatg
cacaccattgaatctgtgaaggatcctcagaccttgataaataacatccaggtggtacga
tctattgctccaatgctcaatgagaagttgaaaccaagactacttaccctacttccctgc
atttttggatgtattcggcactctcatgtagctgttagattagcagcttctagatgcatc
acttccatggccaagtcattgaccatcgatgtcatgggggctgtgatacaaaatgccatt
cctatgttagaagatatgaattccgtaaattcaagacaaggtgctggcatgcttattagc
ttgcttgttcagggaatgggtgtagagctggtgtcttatgctcctttattggtggttcca
cttttaaggtgtatgagtgattgtgatcagtctgttagacgatctgtgacccacagtttt
gctgctttggtgcctcttcttccattagcacgtggtcttccaccacctgttggactcagt
gaagctttttctaaaaataaggaagacgcgcaatttctggaacaactacttgataactcc
cacattgaagattacaaactctgtactgaactgaagatgacattgagaaggtatcagcaa
gaagggataaattggttggcattcttaaaacgtttcaaacttcatggaatcctgtgtgat
gacatgggtcttggtaaaacacttcaggcatcggcaattgtggcatgtgacatagttgaa
cgcctcaccttaaataataaagaagatattccaccatctttgataatttgtccatcaaca
ctagttggacactgggcctttgaaatagagaagtatgttgatgtctccatactttctacg
ctccaatatgttggttcagtacaggaacgggcatctcttcgagattgtttcaacaagtat
aatgtcatcataacgtcatatgatgtggtgcgtaaggatgttgagtatctttcacaattt
cactggaactattgcatactagacgaaggacatattataaggaatgcaaagtccaaaata
acccttgctgtaaagcaattgagatctcaaaatcgtctggtactaagtggaaccccaatt
cagaacaacgtcatggacttgtggtcactttttgattttctaatgcccggttttcttgga
acagagagacagtttcaatcaacttatggaaaaccactactagcagctagagattctaaa
tgttctgctagggatgcagaagctggggcactcgccatggaagcattgcacaagcaggtc
atgcctttccttcttcgacgaactaaagatgaagtgctgtctgatctgccagaaaaaatc
attcaagacagatactgtgacttgagccctgtacaactaaaattatatgaaaggttctct
ggttctcatgttagacaggaaatatcaagtatagtcaaatcaaatgaatcagatgtacca
caggaaagcagtgtttcaacaaaagcatcttcacatatatttcaggcacttcaatatttg
cttaaactttgtagtcatcctttgcttgtcactggagaaaaaatgacagattcaatgaag
tgcctcctgacagagctcatacccgattgttctgacttagtttctgaacttcataaactg
taccactctcctaaattagttgctctccgggaaattcttgaggagtgcggaattggtgtt
gatactttgagttctgatggggctggcagctttggccagcacagagtcttgatatttgca
caacataaagccttattggacattattgaaagagatttattccacgctcacatgaagaat
gttacgtacttgcgactggatggatctgttgagccggagaaacgttttgacattgttaag
gccttcaattctgatcctaccatcgatgctttgctccttacaacacatgtgggtggtctt
ggtttgaatctgacatccgctgacacccttgttttcatggagcatgattggaatccaatg
cgagatcatcaggcaatggacagagcccacaggttaggccagcggaaggttgtaaacgtc
catcgactcataatgcgcggaacagtagaagaaaaagttatgagccttcaaaagtttaaa
gtttcagttgctaacgctgtcatcaattctgaaaatgccagtatgaaaaccatgaatact
gatcaattgcttgatcttttcacatctgctgaaacctccagaaagggagcgacgtcgaca
tcatcgaagcagtcagatgagaactttgatggagaggtaaaagcaatgggtggaaagaag
ggtctgaaagctattcttggaggactggaggaactttgggaccaatctcagtacactgaa
gagtacagtcttagccagttcttagcaaagctcaatggctga
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integrated database retrieval system
