Cucurbita pepo subsp. pepo (vegetable marrow): 111792434
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Entry
111792434 CDS
T05351
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111792434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpep03021
]
111792434
03036 Chromosome and associated proteins [BR:
cpep03036
]
111792434
Transcription machinery [BR:
cpep03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111792434
Coactivators
SAGA/TFTC/STAGA complex
111792434
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
111792434
STAGA complex
111792434
TFTC complex
111792434
SAGA complex
111792434
SLIK complex
111792434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
CBFD_NFYB_HMF
TFIID-31kDa
Motif
Other DBs
NCBI-GeneID:
111792434
NCBI-ProteinID:
XP_023529663
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All DBs
Position
LG04:complement(6925304..6931489)
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AA seq
543 aa
AA seq
DB search
MSIVPKENVEVIAQCIGINNLSPDVALAVAPDVEYRLREIMQEAIKCMRHSKRTTLTADD
VDGALNLRNVEPMYGFASGGPLRFKRAIGHRDLFYLEDKDLEFKDVIDAPLPKAPLDTAV
FCHWLAIEGVQPAIPENAPVEVILPPSDVKINEQKEGLPVDIKLPVKHILSKELQLYFDK
ITELVVSRSNSVLFKKALVSLSTDSGLHPLVPYFTCFIADEVARGLGDYSLLFALMRVVW
SLLQNPHIHIEPYLHQMMPSVVTCLVAKRLGNRLSDNHWELRDFTAKVVALICKRFGHVY
NTLQTKLTKTLLNAFLDPKRSLTQHYGAVQGLAALGMNVVHLLVLPNLEPYLRFLEPEML
LASQKNEMKRHEAWRVYGALLRAVGQYIYDRVKIFPPLPSTLAGSVLRTNAKVITTAFSN
KRKSNADHLEGQPPLKKMVIDGPMGVTPTNSSASYMEGTVIPAASGNSNLISPTSSRPMQ
DETISGSTSSKGKRDDQILKRSAVLSQVWKEDLNSGKLLTSMLDLFGESMFCFIPSPELS
LFL
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgagtatagttcctaaagaaaacgttgaggtcattgcgcaatgtatagggatcaataac
ttgtccccagatgtcgcattggcagttgctcctgatgtggagtatcgtttgcgggagatc
atgcaggaggccatcaaatgtatgcgtcactccaagagaactacgttgacagccgatgat
gttgatggtgcactaaacctgagaaatgtggagccaatgtatggctttgcttctggaggc
cccttgagatttaaaagagctattggacatagggatctgttttaccttgaggacaaggac
ctggaatttaaagatgtcattgatgccccattgccaaaagctcctcttgatactgcagtt
ttttgccactggctagcgattgaaggtgtacagcctgcaataccagaaaatgctcctgta
gaagtaattttaccaccttctgatgtcaaaattaatgaacaaaaggaggggcttcctgtt
gacattaaattaccagttaagcatatactgtccaaggagcttcagctatattttgacaaa
atcacggagcttgttgttagtaggtctaattcagttctttttaagaaggcattagtgagt
ttatctacggactcaggacttcacccattggttccttattttacatgctttatagctgat
gaggttgcacgtggactgggtgattattcccttctttttgctttaatgcgtgttgtttgg
agtcttcttcagaatcctcacatccacattgaaccttatctacaccaaatgatgccatct
gttgtgacctgcctcgtcgcaaaaaggttagggaataggctttcagacaaccactgggaa
cttagagacttcacagcaaaagtggttgctctaatctgtaaaaggttcggtcatgtttac
aacaccctgcagacaaagctcacaaaaactcttctcaatgcatttttagacccaaaacgg
tctctgactcaacattatggtgcagttcaaggcttagcagccttggggatgaatgtggtt
cacctccttgtactaccaaatcttgagccatatctgagatttttggaacctgagatgctt
cttgctagtcaaaagaatgagatgaaacggcatgaagcttggcgtgtttatggagccttg
ctacgagcggtcggtcaatacatatatgatcgtgtcaagatttttcctcctctgcctagc
acgcttgcaggttctgtccttcggacgaatgcaaaagttatcaccacagcattctcaaac
aagcgcaagtcgaatgcagaccacttagaagggcagcctcccctcaagaagatggtaatc
gatggcccgatgggtgtcacgccaactaattcatcagcatcatacatggaaggaacagtc
attccagctgcctctggcaattccaatctgatttcgcctacatcttctcgaccgatgcaa
gacgaaacgatttcaggcagcactagtagtaagggcaagcgtgacgatcaaattcttaaa
aggtcagctgtcctatctcaagtctggaaagaggatcttaattctggaaagttgttaaca
tctatgttagatttgtttggtgaaagtatgttctgcttcattccatctcctgaattgtcc
ctgttcttgtag
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