Cucurbita pepo subsp. pepo (vegetable marrow): 111792518
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Entry
111792518 CDS
T05351
Name
(RefSeq) probable E3 ubiquitin-protein ligase XERICO
KO
K16285
RING/U-box domain-containing protein [EC:
2.3.2.27
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111792518
Enzymes [BR:
cpep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111792518
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111792518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf_RING_Vps8
zf-ANAPC11
Zn_ribbon_Com
Rad50_zn_hook
zf-RING_16
zf-C3HC4_4
Auto_anti-p27
zf-C2HC5
zf-RING_Vps41
Zn_ribbon_RlmA
Motif
Other DBs
NCBI-GeneID:
111792518
NCBI-ProteinID:
XP_023529803
LinkDB
All DBs
Position
LG04:complement(6703613..6705878)
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AA seq
165 aa
AA seq
DB search
MGLSSLPAPSEGVFNVLVNTALSFSMFKCFVRLILQVVGILLSPPSLAPPSDSLENSSEL
GDSNFGSSWNYIETFQNRYPTIKFAKVEDSKCHEHDCPVCLTWFEPESEINRLSCGHLFH
TLCLKKWLDYLNITCPLCRTPLMSEEEKLCFCSSTEHDIPRVLRS
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atgggcctctccagtctcccagctccatctgaaggagtctttaatgttcttgtaaacact
gcactatcattttccatgttcaaatgctttgttcgtttgatccttcaagtcgtaggaatc
cttctctcaccaccatccttggctccaccatcagattccttggaaaattcctcagagttg
ggggattccaattttggttcttcttggaattacatcgagacgtttcagaaccgatatcca
acgattaagtttgctaaagtagaggactccaaatgtcatgaacatgactgccctgtttgc
ttaacttggttcgaacctgaatcggagataaaccgcttatcttgtggccatctttttcac
acattgtgcttgaagaagtggctggactacttgaacattacatgtcctctttgcagaact
cctcttatgtccgaagaagagaaattgtgcttttgttcgtcgacggagcacgatattcct
cgagtattaagatcttaa
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integrated database retrieval system
