Cucurbita pepo subsp. pepo (vegetable marrow): 111792573
Help
Entry
111792573 CDS
T05351
Name
(RefSeq) serine/threonine-protein kinase VPS15
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
111792573
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cpep01001
]
111792573
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111792573
Enzymes [BR:
cpep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
111792573
Protein kinases [BR:
cpep01001
]
Serine/threonine kinases: Other
VPS15 family
111792573
Membrane trafficking [BR:
cpep04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
111792573
Autophagy
Autophagosome formation proteins
PI3K complex
111792573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS15-like_hel
WD40
Pkinase
WD40_Prp19
WDR55
WD40_WDHD1_1st
WD40_CDC20-Fz
NBCH_WD40
Beta-prop_TEP1_2nd
HEAT
EIF3I
PK_Tyr_Ser-Thr
Beta-prop_EML_2
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
PPP2R1A-like_HEAT
WDR90_beta-prop_4th
APH
Beta-prop_CAF1B_HIR1
HEAT_EZ
Cohesin_HEAT
HEAT_2
Beta-prop_Vps41
TCAD9
Motif
Other DBs
NCBI-GeneID:
111792573
NCBI-ProteinID:
XP_023529849
LinkDB
All DBs
Position
LG04:9489919..9499403
Genome browser
AA seq
1542 aa
AA seq
DB search
MGNKIARTTQVSASEYYLHDLPSSYNLVLKEVLGRGRFFKSILCKHDEGLVLVKVYFKRG
DFIDLKEYERRLSQIKEIFRALPHPHVWPFQFWQETDKAAYLLRQYFFNNLHDRLSTRPF
LNLIEKKWLAFQLLLAVKQSHEKGICHGDIKCENVLVTSWNWLYLADFASFKPTYIPYDD
PSDFSFFFDTGGRRLCYLAPERFYEHGGELQDAHDAPLRPSMDIFAVGCVIAELFLEGQP
LFELSQLLAYRRGQYDPSQLLEKIPDSGIRKMILHMIQLEPELRLSAENYLQDYANVVFP
NYFLPFLHNFYCCWNPLHSDTRVALCQKVFPKILEQMTSCRSSGLTGTEKGSPKITMSGL
PQYMNTKQNEHPTKRESIEKGLPREQFELLGDVDTLFKEVKQNNYHSSPEQLLEEVATKN
ITTCGDQSPGELFQSISNAFRRNDHPFLKKITMNNLSSLMSSYDSQSDTFGLPFLPLPEE
SMRCEGMVLIASLLCSCIRNVKLPHLRRAAILLLRSSALYIDDEDRLQRVLPYVIAMLSD
SAAIVRCAALETLCDILPLVRDFPPSDAKIFPEYILPMLSMIPDDPEESVRICYASNIAK
LALTAYGFLIHSISLREAGVLDKLSIPQKPSALSSETPGQLGKLHGDAQLAQLRKSIAEV
VQELVMGPKQTPSIRRALLKDIGNLCCFFGQRQSNDFLLPILPAFLNDQDEQLRAVFYGQ
IVYVCFFVGERSVEEYLLPYIEQSLNDTAEPVIVNGLDCLAILCKRGFLRKRILLEMIEH
AFPLLCYPSQWVRRSAATFIAASSERLGAVDSYVFLAPVIRPFLRRQPTSLASEKALLCC
LKPPISREIYYEVLENARSSDMLERQRKIWYNSSPQSVNWESIDLLKKGMGELNLMKNWP
IKPQSSDGKNPADGLFLPPELPDGDDSEEKFRGIKTPASNVSSKAEVSDPVFSEKLQLSG
FISPQVSGINSFMLDKTSEGIPLYSFSLDKRETGFHSVSSDSPLELNSLEFDSSSIPWME
PVNKSFNMASSAPAPKLVSGSLCVGSGSKQFYRVVHEPDGRENDQTSYISSKFQEIGPSS
ALKGNSSVVEDVPSTNDSTSSPSFTRASSVPDSGWRPRGVLVAHLQEHRSAVNDIAVSTD
HNFFVTASEDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCASMLRGSAQVVVGSCDGL
IHMFSVDYYSKGFGNVAEKYSGIADIKKKDIKEGAILSMMNYSTDTSQMVMYSTQNCGIH
LWDTRTNVNVFTLKSTPEEGYVSSLLAGPCGNWFVSGSSRGVLTLWDLRFLVPVSSWKYS
VLCPIERMCLFVHPPNTSVATAARPLIYVSAGCNEVSLWNAENWSCHQILRVASYDNETE
MSDLPWALARPSSKGNPVQDLRRNVNPKYKVDELNEPPPRLHGIRSLLPLPGGDLLTGGT
DLRIRRWDHYSPNRTYCVCGPNVKGIGSDDFYETRSSFGVQVVQETRRRPLSTNLTTKTI
LTAAATDSAGCHRDSISSLASVKLNQRLLLSGSRDGAIKVWK
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacaaaattgcacgaacaacccaagtctccgcctcggagtattaccttcacgac
cttccttcaagctataatctggttctgaaagaggtacttgggcgaggccggttcttcaag
tcgattctctgcaagcacgacgagggcttagtcctcgtcaaggtgtacttcaaacgaggc
gacttcatcgatctcaaagagtacgagcgccgtctctctcagatcaaagagattttccgt
gcccttccccaccctcacgtttggccgttccagttttggcaagaaacggataaggcagcc
tatctattgaggcaatacttcttcaacaatttgcacgatcgtttaagtacccgacctttc
ctcaatcttatcgagaagaaatggttggcatttcagttactccttgctgtcaaacagagc
catgagaaaggaatttgtcatggtgatattaagtgcgagaatgtacttgttacttcttgg
aattggctctaccttgctgattttgcgtcattcaaacctacttacattccttatgacgac
ccctcagatttttccttcttttttgatactggtggaagaaggctatgttatctagcacct
gagaggttttatgagcatggaggggagttgcaggatgcacatgatgcgcctttaaggcca
tctatggacatatttgctgtagggtgtgtaattgcagagctttttctggaggggcaacca
ttatttgaactctctcagcttcttgcttatcgtagaggacaatacgatccaagccaactt
cttgaaaagatcccagattctggaatccgcaaaatgatacttcatatgatccagctggaa
ccggagttgcgtctttctgctgaaaactacctgcaggattatgctaatgttgtgttcccc
aactatttcttgccatttctgcataacttctattgctgttggaatcctcttcactctgat
acaagggtcgcattgtgtcagaaagttttccccaagattcttgagcaaatgacaagttgt
aggtcaagtgggttgactggtactgaaaaaggatctcccaaaattaccatgagtggattg
ccacaatatatgaatacaaaacagaatgagcatccgacaaagagagagagcatagaaaaa
ggattaccacgtgaacaatttgaacttcttggtgatgttgatactctgttcaaggaagtc
aaacagaataattatcattctagtcccgaacagctactggaggaggtagccaccaaaaat
attacgacctgtggagatcaatctcctggtgagctgtttcagagcatctccaatgcattc
aggagaaatgaccacccttttctgaagaaaattaccatgaacaatttgagctcattgatg
tccagctatgatagtcaatctgatacatttggcctgcctttcttaccattacctgaagag
agcatgagatgcgaaggcatggttcttattgccagcctgctttgttcctgcatacgcaat
gtcaagttaccacacttgaggagggcagctatacttttgctaaggtcttctgctttgtac
attgatgatgaggatcgcttgcaacgtgtactcccttatgttattgccatgctttcggat
tctgcagctattgttcgttgtgcagcattggagactttatgtgatattttgcctttagta
cgagattttcctccaagtgatgcaaaaatttttccggagtatatacttccgatgctttca
atgattcctgatgatccagaggaaagtgtgaggatttgttatgccagcaatattgccaag
ctggcactgactgcttatggatttttgattcactctataagcttgagggaagcaggtgtc
cttgataaattaagcattccacagaagccatcagctctgagcagtgagacacctggacaa
cttgggaagctgcacggtgatgcccagcttgcacaactgagaaagtctattgcagaggtt
gttcaagagcttgttatgggtccaaagcaaactcctagcatccggagagcacttctaaag
gatattggtaatctttgctgtttttttggccagagacagagtaacgactttctcttacct
atccttcctgcttttttaaatgatcaagatgagcaactgagggcagtattttatgggcaa
atagtgtacgtttgcttctttgttggtgaaaggagtgtggaggaatatcttttaccatat
attgagcaatccttaaacgatactgcagaacctgtcattgttaatggattggattgcttg
gctattttgtgtaaaagaggtttcttgaggaagaggatattgcttgagatgattgagcat
gcttttcccttattatgttatcccagtcaatgggtaagaaggtctgctgctacttttatt
gctgctagcagtgagaggttaggtgcagttgattcctatgtatttcttgctccagttata
cggccattcctccgtagacaaccaacatctttagcttctgagaaagccctgctttgttgc
ttgaagcctccaatctcccgagagatatactatgaagttcttgaaaatgcgaggagctca
gatatgctggaaaggcaaaggaagatatggtacaactcttcacctcagtccgtaaactgg
gaaagtatagatttactcaagaaaggaatgggagagttgaatttaatgaagaattggcca
atcaaaccacaaagttctgatggtaaaaaccctgctgatggtctatttctcccgcccgag
ctacctgatggtgatgattctgaagaaaagtttagagggattaaaactcctgcatccaat
gtgtcgagcaaagctgaagttagtgatccagtattctcagagaagttacaactctctggc
tttatttcaccacaagttagtgggatcaacagtttcatgcttgataaaacgtcagagggc
attcctctgtactccttcagtttggacaagcgggaaacaggatttcattctgtgtcttct
gattctccattagaattgaactctctagaatttgattcctcatccataccttggatggag
cctgtaaataaatcatttaatatggctagctcagccccagcacctaaacttgtttcaggc
tccttatgcgttggtagtggctctaaacagttctacagggtggttcatgagccagatggc
agagaaaatgatcagacatcctatatcagtagtaaatttcaggagattggaccatcaagt
gcactcaaaggaaactcttcagtggtagaagatgttccctctacaaatgattcgacatca
tcaccatcttttacaagagcatcatcagttccagattcaggttggagacctcgtggtgtg
cttgttgcacacttgcaagagcatcgctctgctgtaaatgacattgctgtttcaaccgat
cacaatttttttgttactgcatctgaagattccactgtaaaggtgtgggattcaagaaag
ctggagaaagacatctcgtttaggtcaaggctaacttatcatctggagggaagtcgagca
ctttgtgcttctatgctccgggggtctgctcaagttgttgtcggttcttgtgatggtttg
attcatatgttttcagttgattattactccaaaggttttggcaatgttgctgaaaagtat
tcaggtattgctgatattaaaaagaaggacatcaaagaaggtgcaatacttagtatgatg
aactactctaccgataccagtcagatggttatgtatagtacgcagaattgtggaatacat
ttgtgggacaccagaacaaatgtcaatgtttttacattgaaatcaactcctgaggagggt
tatgtgtcatcgcttttggcgggcccatgtggaaattggtttgtatctgggtcttctagg
ggtgtgctgacactttgggatcttaggttccttgtacctgtgagctcgtggaaatattca
gttttgtgccccattgaaaggatgtgcctctttgtgcatcctccaaatacttctgtcgct
actgctgcaaggcccctcatttatgtttctgctggctgtaatgaagtttccctctggaat
gcagagaattggagctgtcatcagatactgagggtggcaagttatgacaacgaaactgaa
atgtctgacctgccttgggccctggctagaccgtcaagtaagggaaatcctgtgcaagat
ctaagacgtaatgttaatccaaagtacaaagttgatgagttgaatgaacctccccctcgg
cttcatggtattcgctcattgcttcctttacctggaggcgatttgttgactggaggcact
gacttgagaattcgtcgatgggaccattacagtcctaacagaacttactgtgtctgtgga
ccaaacgtgaagggaattggaagtgacgatttctatgaaactagatctagtttcggtgtg
caagttgtgcaggagactaggagacgacctctatcaacaaacttgaccacaaagactatt
ctgacggctgctgcaacagattcagctggttgccatcgagactccatttcatccttggcc
tccgtgaagttgaaccagagactcctattatcaggcagtagggatggagctattaaagtt
tggaagtaa
DBGET
integrated database retrieval system
