Cucurbita pepo subsp. pepo (vegetable marrow): 111792624
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Entry
111792624 CDS
T05351
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111792624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpep03041
]
111792624
Spliceosome [BR:
cpep03041
]
Common components
Common spliceosomal components
SR proteins
111792624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
111792624
NCBI-ProteinID:
XP_023529917
LinkDB
All DBs
Position
LG04:4459819..4465429
Genome browser
AA seq
305 aa
AA seq
DB search
MSHFGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFA
FVRYKYADEAQKAVDRLDGTVVDGREITVQFAKYGPNAEKIQKGKISEPFPKSRHRSRSR
SPRRRYRDDYRDRDYRRRSRSRSRSLDRSDRDRRGRERERERDYRRRSRSISPRRPSPDY
SKGRGRGRYVDERRNRSRSHSRSRGRSRSVNSASPGRRSPSPRRSLSPRRSLSPRRSLSP
RRSLSPRRSLSPQRSLSPRRSPSPRGESPERNGDGGRSPTPRSVSPRGQPVDSRSPSPQN
SDVDK
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtctcattttggaaggtcaggtcctccagatattacagacacctactcgcttctcgtg
ctcaacatcaccttccgcaccactgctgatgacctctacccgcttttccacaagtatggt
aaggttgtcgatatcttcatccccagagatcgaaggactggtgattctagaggttttgca
tttgtgcgttacaagtacgcagatgaagctcagaaagcagtggacaggctagatggcact
gtggttgatggacgagagataactgtccagtttgctaaatatggtccaaatgctgaaaaa
attcagaaaggaaaaatcagcgaaccatttccaaagtcaagacacaggtctagaagtcgt
agtccacggagacgatatcgggatgattacagagatagggactataggaggagaagcaga
agtagaagcagaagcttggacaggagtgatcgtgataggcgggggagagaaagagagagg
gaaagagactatcgcaggcggagcaggagcatcagtcccaggcggcctagtcctgattac
tccaaggggaggggaagaggacgctatgtagatgaacgtagaaatcgcagtcgcagccat
agccgaagtcgtggccgtagtcgttctgttaatagtgcttctcctggtagacgaagccct
agtcctcgaaggagtctgtctcctcgaaggagtctttcaccacgaaggagtctttcacca
cgaaggagtctttcaccacgaaggagtctttcacctcaaaggagtctttcacctcgaagg
agtccatctccaaggggtgaaagtcctgaaagaaatggtgatggtggaaggtctccaact
cctaggagtgtttcaccacgaggtcaacctgttgattcacgaagcccatctccacaaaac
tcggatgttgataagtga
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