Cucurbita pepo subsp. pepo (vegetable marrow): 111792631
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Entry
111792631 CDS
T05351
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111792631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111792631
03009 Ribosome biogenesis [BR:
cpep03009
]
111792631
04131 Membrane trafficking [BR:
cpep04131
]
111792631
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpep04147
]
111792631
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
111792631
Ribosome biogenesis [BR:
cpep03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
111792631
Membrane trafficking [BR:
cpep04131
]
SNARE
SNARE associated proteins
Others
111792631
Autophagy
Aggrephagy
Other aggrephagy associated proteins
111792631
Exosome [BR:
cpep04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111792631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_5
AAA_33
AAA_22
AAA_14
NPHP3_N
TIP49
RNA_helicase
AAA_17
nSTAND3
Mg_chelatase
AAA_28
ATPase_2
AAA_18
Parvo_NS1
IstB_IS21
Viral_helicase1
Vps4_C
ABC_tran
NB-ARC
AAA_7
NACHT
AAA_lid_PRS2_C
DUF815
TsaE
ResIII
AAA_24
Zeta_toxin
SLFN-g3_helicase
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
111792631
NCBI-ProteinID:
XP_023529934
LinkDB
All DBs
Position
LG04:12282110..12286958
Genome browser
AA seq
820 aa
AA seq
DB search
MADPTGSLASDKAHASSHSSSDQQNTKRDFSTAILERKKSPNRLVVDEAINDDNSVVSLH
PATMEKLQFFRGDTILLKGKKRRDTVCVVLSDEQCEEPKIRMNKIVRANLRVRLGDVVSV
HQCPDVKYGKRVHILPVDDTIEGVTGNLFDAYLKPYFSEAYRPVRKGDLFLVRGGMRSVE
FKVIETDPGEYCVVAPDTEIFCEGEPIKREDEERLNEVGYDDVGGVRKQMAQIRELVELP
LRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESE
SNLRKAFEEAEKNAPSIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKTRAHVIV
IGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERVARDT
HGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEVLNSMAVTNEHFQTALGSSNPSA
LRETVVEVPNVSWDDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG
KTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA
TQRGSSVGDAGGAADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLI
YIPLPDESSRLQIFKACLRKSPVSKDVNLSDLSRYTHGFSGADITEICQRACKYAIRENI
EKDLERERKERENPEAMEEDDIDEVSEIKAAHFEESMKYARRSVSDADIRKYQLFAQTLQ
QSRGIGSEFRFPDRTDNVTAGVADPFSSAVAAGDDDDLYS
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggcagacccaacaggttcattagcttcagataaggctcatgcatcctctcattcttca
tcggaccagcaaaacactaaacgggatttttccactgcaattttggaacgcaagaagtct
ccgaatcgtttagttgttgatgaggctatcaatgatgataactctgtggtttctttgcat
cctgctaccatggaaaagctgcagttctttagaggagatactattttattgaaggggaag
aagcggagagatacagtgtgcgttgttctttccgatgagcaatgtgaagagccaaaaatc
agaatgaataaaattgtacgagccaatctcagagttcgtcttggagatgttgtatctgtc
catcagtgtccagatgtgaagtatggaaagcgggttcacatcctccctgttgatgataca
atcgagggtgttactggcaacctatttgatgcatatttgaaaccttatttctcggaagca
tatcgacccgttaggaagggtgacctgttcttagtcaggggtggaatgagaagtgttgag
ttcaaggtcatagagacagaccctggtgaatactgcgttgttgcacctgataccgagatc
ttctgtgagggagagcccatcaaacgtgaggatgaggagagattaaatgaagtcggatat
gatgatgttggaggagttaggaagcaaatggctcagatccgtgaactagtggaattacca
cttagacatccgcaacttttcaaatcgattggcgtaaagcctccgaaagggatattgcta
tatgggcctcctggatctggaaaaactcttatagccagagctgttgctaatgagacgggt
gcatttttctttctgattaatggtccagaaataatgtctaagttagctggtgagagtgaa
agcaatctgaggaaggcgtttgaggaagctgaaaagaatgccccttcaattatatttatt
gatgaactggattccattgctccaaagagggagaaaacacatggagaagtggaaaggcgt
atcgtatcccaacttcttaccttgatggatggcctcaaaactagagcacatgttattgtt
attggagcaacgaacagacccaacagcattgaccctgctctgaggagattcggaagattt
gatcgagagattgatattggtgttcctgatgaagtaggacgattggaagtccttaggatc
catacaaagaacatgaaacttgccgaggatgtggatcttgaaagagttgcacgggatact
catggttatgtcggtgctgatctcgccgctctttgtactgaagcagcactccagtgtatt
cgcgagaaaatggatgtcattgacttggaagatgaaacaattgatgctgaggttttgaat
tccatggctgtaactaatgaacatttccaaactgctttagggtcttcaaatccttcggcg
ttgcgggaaactgtcgtggaggttccgaatgtttcgtgggatgatatcggtgggttagaa
aatgttaaaagagagctgcaggagactgtccaatatccagtggagcatcctgagaagttt
gaaaaatttggcatgtcaccatctaaaggtgtcctcttttatgggcccccgggctgtggt
aagacgctgctggctaaggcaattgccaatgaatgtcaggccaactttataagtgtgaaa
ggacctgagttgctgacaatgtggttcggtgaaagtgaggcaaatgtgagagagatattt
gacaaggctcgtcagtcggctccttgtgtactatttttcgatgaactcgattctatcgca
actcagcgtggcagttctgttggagatgctggtggtgcagcagatagagtcttgaaccaa
cttcttacagaaatggatggcatgactgcgaagaagaccgtgtttataattggggcgaca
aacaggccagacattatagacccggcgctgctcaggccgggacgtctggaccaactaata
tacatcccgctccctgacgagtcttcacgtcttcaaattttcaaagcatgtctccgaaag
tcgccagtgtcaaaagatgtcaatctatcagatctttcacggtacacccatggctttagt
ggagctgatatcactgaaatatgtcagcgtgcctgcaaatatgccattagagaaaatatc
gagaaggatcttgagagggagagaaaggaaagagaaaacccagaagccatggaggaagac
gacatcgacgaagtctcagagataaaggcagcacattttgaggagtcaatgaagtatgct
cgtcgaagtgtcagcgatgcagacatcaggaagtaccagctgtttgctcagaccctacag
caatctcgtgggatcggatcggaatttcggttccctgatcgaaccgacaatgtaactgca
ggagtggctgacccgttttcttccgctgttgccgctggagatgatgatgatctttacagc
tga
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