Cucurbita pepo subsp. pepo (vegetable marrow): 111792661
Help
Entry
111792661 CDS
T05351
Name
(RefSeq) two-component response regulator ARR12-like isoform X1
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111792661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpep03000
]
111792661
Transcription factors [BR:
cpep03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
111792661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
DNA_pol_phi
KaiA_N
Motif
Other DBs
NCBI-GeneID:
111792661
NCBI-ProteinID:
XP_023529979
LinkDB
All DBs
Position
LG04:10362227..10366420
Genome browser
AA seq
697 aa
AA seq
DB search
MTVETHSVTSVGDDGATDRFPVGMRVLAVDDDPICLKVLETLLRRCQYHVTTTKQSIEAL
KMLRENRNNFDLVISDVNMPDMDGFKLLELVGLEMDLPVIMLSAHSDTELVMKGISHGAC
DYLLKPVRIEELKNIWQHVIRRKKLEPKAKNKFPSEDKALNGGSEGEQGFSSTSNADNAK
FNRKRKDQDDDDDEDGKDNGLDNDDPSNQKKPRVVWSVELHKKFVSAVNQLGLEKAVPKK
ILDLMNVEGLTRENVASHLQKYRLYLKRISNVASQQVSMVATFGSKDGAFMGMGSLDGYG
DLHGFAGMGRLQNSSLSSYSPVGMLGRLNSPAGMSLRGITSSGLIQQNSKNLNSAISNLG
KLQPTTMLPPNQPTNLLQGIPTSLELSQLQHSKSTIPIGDFNIINETSGFGVPNSFPDSR
VNIGNSTNLVSTAPLMLQGTMPTYGNQTSLRVDPLNGETFDVDIGGSNFLDPDPSNGTWQ
GAAQLSRFSANSLNQNQAYPNDQFNAINSSISLTPSTFGNVSVDFSSRSAVAAPLQDSRD
MQCQAGVVGSVIPTINTMPKQSWEELKHDYSRNVQHNLGAINSLISGNETLNPLSQSFNQ
NNLVYDRKVSSSLMVPSNAAPLSFAQHNMVEKLGPNTKTNVDGNYLLNQTKSHDGSTQGS
SESLDYIMNAMIKREQNEIPEVNGEFGFDNFSLGSCI
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgactgtggagactcattccgttacttctgtcggtgatgatggtgccactgatcgtttt
cctgttgggatgcgggttcttgctgttgacgacgaccctatttgtctcaaagtgcttgaa
actctcctccgtagatgccaataccatgttaccacgacgaagcagtccattgaggctttg
aaaatgttgagagaaaatagaaacaattttgacttggttatcagtgatgtgaacatgcct
gatatggatggtttcaagcttcttgagttggtggggcttgagatggacctacctgtgatc
atgttatcagcacatagtgatactgagcttgttatgaaggggatttcgcatggggcatgt
gattatctgttgaaaccggttcgaatcgaggagttgaagaacatttggcagcatgtgatt
cggaggaagaagctcgaaccgaaggcaaagaacaagttccctagtgaagataaggctctt
aatggaggcagtgaaggtgaacaaggtttctcatcaaccagtaatgcagacaatgcgaaa
ttcaataggaaacggaaggaccaagacgacgatgacgatgaagatggaaaggataacggg
cttgataatgacgacccctcgaaccagaagaagcctagagtagtgtggtcggttgagttg
cacaagaaattcgtttcagcggttaatcagttgggtctcgaaaaggctgtgcctaagaaa
atcctggatctgatgaatgttgaaggacttaccagagaaaacgtagcaagtcatttgcag
aaatataggctttacctgaaaagaatcagcaatgtggcatcccagcaagttagcatggtt
gctacgtttgggagtaaagacggcgcgttcatggggatgggttcgctcgatggatatgga
gatttacatggctttgcaggaatgggacggcttcaaaactcttcgttatcatcttattca
cctgttggaatgcttggaagattgaactccccggctggaatgagtctgcgtggaatcact
tcttctggactgatacagcaaaactccaaaaatttgaactccgccattagtaaccttggg
aagctccagccaactactatgctgcctcctaaccaacctactaatctgttgcaaggaatt
ccgacgtcgctcgagctcagccagctgcaacacagcaagtccaccattcctattggagac
ttcaatataataaatgagacgtctgggtttggagttcccaacagtttccctgatagtaga
gtgaatattggaaactcaaccaatttggtttccactgccccgttgatgttacaaggaacc
atgccaacatatggaaaccagacttcccttagagtggatccgctgaatggagaaactttt
gacgtagacattggtggttcaaattttttggatcctgatccttctaatggaacctggcag
ggagcagcacaattgtctagattctcagccaattctttgaatcaaaatcaagcctatcct
aatgatcaattcaatgcaataaactcaagcatttctttgaccccctcaacgtttgggaat
gtctcggttgatttttcctcgagaagtgcagttgcagctcccttgcaggattcaagagat
atgcagtgtcaggcaggggtagttggcagtgttattccaactataaataccatgccgaag
cagagttgggaagagcttaaacacgattacagtcgaaacgtgcagcataatcttggtgca
atcaattctctaatttctgggaatgagactctaaaccccttaagccagagtttcaatcag
aataatctagtatatgatagaaaggtgagttcatctttgatggtcccatcaaatgctgct
ccactgtccttcgctcaacataacatggtcgaaaaattgggtcctaacacgaagacgaat
gtggatggcaactatctgttgaatcaaacaaagtcacacgatgggtcgactcagggcagt
tccgagtccttggattatataatgaatgcgatgatcaaacgggaacaaaatgaaatacca
gaagtgaatggagaatttggatttgataatttctctctaggatcgtgtatttga
DBGET
integrated database retrieval system
