Cucurbita pepo subsp. pepo (vegetable marrow): 111792825
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Entry
111792825 CDS
T05351
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00040
Pentose and glucuronate interconversions
cpep01100
Metabolic pathways
Module
cpep_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111792825
Enzymes [BR:
cpep01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
111792825
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Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
ZirS_C
Beta_helix
ET
NosD
Motif
Other DBs
NCBI-GeneID:
111792825
NCBI-ProteinID:
XP_023530186
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Position
LG04
Genome browser
AA seq
391 aa
AA seq
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MSILRGFLLLFFPFMFLNSSAAIVFSNNVVSLGAKPDGKFDSTKAFESAWANACGSMRPT
SIYVPLGRYYLRTLTLNGPCKNNAIFIRIDGTLVAPSDYKVIGNSAAWILFRRVDGVTIS
GGVFDGKGSGLWACKNSTKTCPSGATTIEISNSKNVVLSALTSLNSQMFHIVVNGCQNIK
MKGLKVLASGNSPNTDGIHVQLSSDVTILNSKIGTGDDCISIGPGTSNLWIENIVCGPGH
GISIGSLAKDLEEAGVQNVTVKKALFSRTQNGVRIKAWGRPSNGFVKNILFQHIVMDNVQ
NPIVIDQNYCPSHKGCPGQASGVKISDVTYQDIHGTSATQIAVKFDCSPTNPCSGIKMED
VKLSYKDQIAGATCSHVGGTATGSVEPSNCL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattcttaggggctttcttcttcttttctttccttttatgttcctaaattcttcg
gctgcaattgtcttctcaaataatgttgtgagtttaggagccaagcccgatggcaaattt
gactcaacgaaagcatttgaaagcgcatgggctaatgcatgtggctccatgagaccaacc
tctatttatgttccactaggaagatattaccttcgtactctaacattgaatgggccgtgc
aagaataatgccattttcatacgcattgatggcactttggtggctccatcagactataaa
gttattggcaattctgcagcttggatcttgttcagacgagttgatggagtaactatctca
ggtggagtttttgatggtaaaggaagtgggttatgggcatgcaagaactcgaccaagact
tgtcctagtggggccacgacaattgaaatctccaactctaagaatgtagtgcttagtgca
ttaacatcactcaatagtcaaatgttccatatagtcgtaaatggttgccaaaatatcaaa
atgaaaggacttaaggtcttggcttctggcaatagtcccaatactgatggtattcacgta
caactatcatctgatgtaactatactcaactccaagataggcacgggagatgactgcata
tccatcggtcctgggacctccaacttgtggattgagaatattgtttgtgggcccggtcat
ggaataagcattggaagtctagcaaaggacttagaagaggctggagtgcagaacgtgacc
gttaaaaaagctttattttcacgcacccaaaacggggtgagaatcaaggcatggggtagg
ccaagcaatgggtttgttaagaatattctcttccaacatattgttatggacaatgttcaa
aatccaattgttattgaccaaaattattgcccaagtcacaaaggttgtccgggtcaggct
tctggcgtcaaaatcagtgacgtgacgtaccaagacattcatggaacatcagccactcaa
attgcagtgaaatttgattgtagtccaacaaatccatgcagtggaataaaaatggaggac
gtaaaactttcttataaggatcaaatagctggagcgacgtgtagccatgtaggaggaaca
gctaccggtagtgttgaaccgagtaattgcttgtag
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