Cucurbita pepo subsp. pepo (vegetable marrow): 111792866
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Entry
111792866 CDS
T05351
Name
(RefSeq) ruvB-like protein 1 isoform X1
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111792866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpep03036
]
111792866
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cpep03037
]
111792866
Enzymes [BR:
cpep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
111792866
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
111792866
Chromatin remodeling factors
SRCAP complex
111792866
INO80 complex
111792866
INO80 complex (yeast)
111792866
SWR1 complex
111792866
ASTRA complex
111792866
Cilium and associated proteins [BR:
cpep03037
]
Motile cilia and associated proteins
Dynein assembly factors
111792866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
RuvB_N
AAA
AAA_22
AAA_5
AAA_16
AAA_19
AAA_18
Mg_chelatase
bpMoxR
AAA_25
DnaB_C
TsaE
Cdc6_lid
AAA_7
NPHP3_N
AAA_28
AAA_11
nSTAND3
Zeta_toxin
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
111792866
NCBI-ProteinID:
XP_023530241
LinkDB
All DBs
Position
LG04:1718078..1725654
Genome browser
AA seq
458 aa
AA seq
DB search
MDKMKIEEVQSTSKKQRVATHTHIKGLGLEASGKALPLASGFVGQSEAREAGGLVIDMIR
QRKMAGRALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFR
RSIGLRIKEKKEVYEGEVTELSPEETESMTGGYGKSISHVIIGLKTIKGTKQLKLDPTIY
DALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKRKEIVQD
VTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEVNKVVNRYIDEGIAELVPG
VLFVDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNVRGTDMNSPHGIPVDLLDRL
VIIRTQTYGPAEMIQILAIRAQVEELVVDEESLAFLGEIGQRTSLRHAVQLLSPASVVAK
MNGRDSICKGDLKEVCALYLDAKSSARLLQEHQEKYIS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggacaagatgaagatagaagaggttcaatcaacctctaagaagcaacgggtagccact
cacactcacattaaaggacttggtcttgaggcatcaggaaaggcattgccactagcttca
ggttttgtgggtcaatcagaagcaagagaagcaggagggctagttattgatatgatacga
cagaggaaaatggctggccgagcacttcttctagctggacctcctggtactggaaagact
gcgcttgcacttggaatatcacaggagctaggaagcaaggttcccttttgtccaatggtt
gggtctgaagtatactcatccgaagtgaagaaaaccgaggttttgatggaaaatttcaga
cgatctattggtctacgtatcaaggagaagaaagaggtctatgagggagaggtgactgaa
ctttcaccagaagaaacagagagcatgactggtggctatggtaaaagcataagccatgtt
atcattggtttaaaaactattaaaggaacaaagcaattaaaattggatccgaccatctat
gatgccttgattaaagagaaggtagctgttggtgatgttatatatatagaagcaaatagt
ggagctgtgaaaagggtgggtagaagtgatgcttttgctaccgagtttgatcttgaagct
gaagaatatgttccacttcctaaaggggaagttcacaagaggaaagaaattgtccaggat
gtgactctacatgatctagatgctgccaatgctcggcctcaaggtggacaagatatacta
tctctaatgggtcagatgatgaagccaaggaagacggaaatcacagacaagttgcggcaa
gaagtaaataaggtggttaaccgatatattgacgaaggtatagcagaacttgtcccggga
gttctattcgttgatgaggtgcatatgctggatatggagtgcttttcgtacttaaatcga
gctttagagagctcactctccccgatagtgatctttgctacaaacagaggaatctgcaat
gtacgagggactgatatgaatagccctcatggaatacctgtcgacttgttagaccgattg
gtgatcatccgaacacaaacgtatggccctgctgagatgattcagatattggccattcgg
gcacaggtggaagaattggttgttgatgaagaaagtttagctttccttggggagattggc
cagagaacatctttaagacacgcggttcagttgctatcgcctgctagcgtcgtggcgaaa
atgaatggtcgtgatagcatatgcaagggagatctcaaagaagtttgtgcactctatctg
gacgccaagtcttcggcaaggcttcttcaagaacaccaagaaaagtacatttcttga
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