Cucurbita pepo subsp. pepo (vegetable marrow): 111792925
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Entry
111792925 CDS
T05351
Name
(RefSeq) glutamate-rich WD repeat-containing protein 1
KO
K14848
ribosome assembly protein RRB1
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpep03009
]
111792925
Ribosome biogenesis [BR:
cpep03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
111792925
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
Beta-prop_RIG_2nd
CAF1C_H4-bd
WD40_Prp19
WDR55
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_SCAP
EIF3I
Beta-prop_EML
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Beta-prop_RIG_1st
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
111792925
NCBI-ProteinID:
XP_023530320
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Position
LG04:9329282..9332939
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AA seq
475 aa
AA seq
DB search
MVRSIKNLKKVKRKSKGSRNGAGASSSSVPSMPAKVWQPGVDKLDEGEELQCDPSAYNSL
HAFHIGWPCLSFDIVRDSLGLVRTEFPHTVYLVAGTQAEKASWNSIGIFKISNVSGKRRE
LLPNKPETDDADMDSDSSDSDEDSEDEEDGGSKAPILQLRKVAHEGCINRIRAMQQNPHI
CASWSDSGHVQIWDFSSHLNTLAESEAEVSQGESSVFNQAPLMKFKHKDEGYAIDWSPLV
PGRLLSGDCKNFIHLWEPSSGTSWNVDAAPFVGHSASVEDLQWSPTEPHVFASSSVDGNI
AIWDVRSGKSPAAYFKAHNADVNVISWNRLASCMLASGCDDGTFSIRDLRLLKEGDSVVA
HFEYHKHPITSIEWSPHEASTLAVSSSDNQLTIWDLSLEKDEEEEAEFKAKTKEQVNAPE
DLPPQLLFVHQGQKDLKELHWHAQIPGMVVSTAADGFNILMPSNIQTTLPSDVAA
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggttcggagcatcaaaaacctcaagaaagtcaagagaaaaagcaagggttcgaggaat
ggggctggagcgtcttcttcatcggtaccttcaatgcccgcaaaggtctggcaaccggga
gtggataagttggacgaaggagaggaacttcaatgtgacccctctgcatacaactctctc
catgccttccacattggttggccctgtttgagcttcgatattgttcgtgactcgttaggc
ttggtgaggacagagtttccacacactgtttatcttgtcgcagggactcaggctgagaaa
gcttcatggaattccattggaatatttaagatatctaatgtgtctggaaagagacgtgaa
ctattgcccaataaaccagagactgatgatgctgacatggacagtgatagcagtgacagt
gatgaggacagtgaagatgaggaggatggtggatctaaggcaccaattttgcagctgcgt
aaggtagctcatgaaggatgcataaatcgtatacgtgccatgcagcaaaatcctcatata
tgtgcatcttggtctgatagtggccacgttcagatttgggacttcagttcgcatctcaat
actttagccgaatcagaagctgaagttagccagggagaatcttcagtttttaatcaggct
ccactaatgaagttcaagcacaaggatgaaggttatgctatagactggagtccacttgtt
cctggaaggcttctgtctggggactgtaaaaattttattcatttgtgggagccttcgtct
ggcacttcatggaacgtcgatgctgctccatttgttggacattctgcaagcgttgaagat
ctgcagtggagtcctacagaacctcatgtatttgcctcctcttctgtggatgggaatatt
gcaatatgggatgtccgttcagggaagtctcctgccgcctattttaaggcacacaatgca
gatgtgaatgttatttcttggaacaggcttgctagctgcatgttggcatcaggctgtgat
gatggaacgttttctattcgtgatctccgattgcttaaggaaggtgattctgtagtagcg
cattttgaataccataaacatcccatcacgtccatagaatggagtccacatgaagcctcc
acactggcagtgtcatcttccgacaaccaattgacaatatgggacctctctttagaaaag
gatgaggaagaagaagctgagttcaaagcaaaaaccaaagaacaagtaaatgcacctgaa
gatttacctccacaacttctatttgttcatcaggggcaaaaggacttgaaggaattacat
tggcatgctcagattccagggatggttgtgtctactgctgcagatggtttcaatatcctc
atgccttcaaacattcaaactactcttccttctgatgttgctgcttga
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