Cucurbita pepo subsp. pepo (vegetable marrow): 111793017
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Entry
111793017 CDS
T05351
Name
(RefSeq) WD repeat-containing protein 11-like
KO
K24260
WD repeat-containing protein 11
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111793017
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cpep03037
]
111793017
Membrane trafficking [BR:
cpep04131
]
Endosome - Lysosome transport
Others
Others
111793017
Cilium and associated proteins [BR:
cpep03037
]
Other cilia and associated proteins
Other cilium assembly proteins
111793017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR11_1st
Beta-prop_WDR11_2nd
TPR_WDR11
WD40_CDC20-Fz
Beta-prop_WDR3_1st
TPR_GEMI5
Beta-prop_RIG_1st
ELYS
Motif
Other DBs
NCBI-GeneID:
111793017
NCBI-ProteinID:
XP_023530451
LinkDB
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Position
LG04:10094776..10113081
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AA seq
1332 aa
AA seq
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MRSPRSSVPPPLPIHSPSQHHDSWDCMLPGPPSRNNFGSADISPSGLLAFSSGSSVSIVD
SRSMQLITVIPMPPPSTTTNSLSPFVTSVRWTPLPLRHELLSTEPSTSHLHLAAADRQGR
IALLDFRLKSPTVWFDTSDYKFGVQDMCWVRSGPDSFLLAAIHGTSGLSLYSVATARCVW
KYDASPEYLSCIRSDPFDSRHFCIIGLKGFLLSVQVLGAKKSDVIMKELRIGADCTELLK
LERDAAAGSSSPASGLFPLYNAKFAFSPQWRHILFVTFPRELVVYDLQYETTLFSTSLPR
GCGKFLDVLPDPNSELLYCPHLDGRLSIWQRKEGEQVHIMSAMEELLPSIGTSVPSPSVL
AVVICQSDSILQNVGKLCSDIPHSHYPDGDADADIDTPFDLFHESHYVSSTHLVSISDDG
KVWNWLATAEGAEDTQKDDAGVSTSTVIGEVPASDSNTDHSNSSTNTFTSEGGKQLDRAS
TSGGRPPSDISKVDLSFKINLVGQLQLLSSAITMLAVPSPSLIATLARGGNHPAVAVPLV
ALGTQSGTIDVIDVSANSVASSFSVHNSTVRGLRWLGNSRLVSFSYSQVNEKTGGFINRL
VVTCLRSGFNRTFRVLQKPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKTPIMLRSL
ALPFTVLEWTLPTVPRSVAERTTMTADTVSSPTKASLSDSKTPNSEGNQDETSESFSFAL
VNGALGVFEVHGRRIRDFRPKWPSSSFVSSDGLITAMAYRLPHVVMGDKTGNIRWWDVTT
GHSSSFNTHREGIRRIKFSPVVSGDHSRGRIAVLFYDNTFSIFDLDSQDPLANSILQHQF
PGTLVLELDWLPLRIDRKDPLVLCIAGADSSFRLVEIIINEKKHGYGPKTVRERFRPMPI
CSPMLLPTPHALALRMILQLGVKPSWLSKRPQLMSGFSAAGGDLRSHMIDLPPVGDSVVP
EMLLKVLDPYRIEGCILDDARAKLYSKLVHKGSALRFAFAAAIFGESSEALFWLQLPSAL
NHLMNKLANKSHQRGKSSASNVDLDEASMLNRISSKGKSVPRTGKKKAFGQGQLMAMAFK
QEELWESANERIPWHEKLDGEEVNQNRVHELVSVGNLEATVSLLLSTPPESSYFYANALR
AVALSSAVSKSLLELAVKVVAANMVRTDRSLSGTHLLCAVGKYQEACSQLQDAGCWTDAA
TLAATHLKGSDYARVLLRWANHVFLSEHNIWRALILYVAAGALQEALAALRESQQPDTAA
MFVLACREIHAEFISNLEHSDDESDSRFLKEKLLKLPGLDPENEDVIAVCEYYGQYQRKL
VHLCMDSMPYSD
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgaggagcccccggtcatcggtgccaccgcctcttccgattcactccccatcacagcac
catgactcttgggactgcatgcttccgggccctccaagccgtaacaacttcggatccgcc
gacatcagcccctccggtctccttgctttctcctccggcagttccgtctccatcgttgat
tctcgttctatgcagctcatcaccgtcattcccatgcctccgccgtcgaccactactaat
tctctttccccttttgtcacctctgtgcggtggacccctctccccctccgccatgaactc
ctctctacagagccctccacctcgcaccttcatctcgccgctgccgatcgccaaggccgc
attgctctccttgatttccgcctcaagtcccctaccgtctggttcgatactagcgactac
aaattcggtgttcaggatatgtgctgggtgcggtctggacccgactccttcctccttgct
gcaattcacggaacctcgggtctctccctctacagtgttgccaccgctcgatgtgtttgg
aaatacgatgcctcccctgaatatttgtcttgcatccgcagcgatcctttcgattcgcgc
catttttgcataattggtctcaaagggtttcttctatcggttcaggtccttggcgcgaag
aaaagtgatgtcatcatgaaggagctacggattggagctgactgcaccgagttgctgaag
ctagaaagggacgctgctgccggatcgtcgtcgccggcctccggcctttttcctctttac
aatgcaaaatttgcattttcgcctcagtggaggcatattctattcgtaacatttcccagg
gagttggtggtttacgacttgcagtatgagaccacgctttttagtacctcattgcctcgt
gggtgtggtaaattccttgatgttttaccggatccgaacagtgagttgctctactgtcct
cacctggatggaaggctcagtatctggcagcgaaaagaaggtgaacaagtgcacataatg
tctgcaatggaagagttgctgccttctattggcacatctgttccatctccttcagttctt
gctgtcgtcatctgccagtccgattccatcctccaaaatgttggcaagctttgttctgat
atacctcattctcattatcctgatggtgatgcagatgcagatattgatactccatttgat
ttgtttcatgaatctcattatgtctcttcaacacacttggtatccatttctgatgatgga
aaagtatggaactggctcgcaactgccgaaggtgctgaagacactcagaaggatgatgca
ggtgtgagtacgagcactgttattggtgaagtaccagcctcagacagcaacactgaccac
tcgaattcttctaccaatacatttacttcagaaggaggcaagcaactagatcgtgccagt
acaagtggtggtcgtccaccttctgacatcagtaaagtggatttgtcttttaagatcaac
ttagttggtcagcttcagcttctttcttctgcaataacgatgttggcagtgccatctcca
tcattaatagctacattagctcgtggaggaaaccatcctgctgttgccgtaccattggtt
gctttagggactcaaagtggaacaattgatgtcattgatgtttctgccaattctgttgca
tcttcgttttctgtacataatagcactgttagaggtttacggtggctagggaattccaga
ttggtgtcgttttcttacagtcaggtgaatgaaaaaactggaggtttcattaatcgtctt
gttgtgacctgtcttagaagtggctttaatagaaccttccgtgttttgcaaaagccagag
cgtgctcccatcagagctttaagggcttcttcatctggaaggtatcttctaatcctgttt
cgagatgctccggttgaagtttgggcaatgacaaagactcctatcatgcttagatcgtta
gctcttccatttacagttttggaatggacgcttccaacagttccacgatctgttgcagag
cgtacaacaatgacagcggatactgtatcttcacccaccaaggcatcattatctgattct
aagacaccaaactcagagggtaatcaagatgaaacgtctgaaagtttttcttttgccctg
gtaaatggtgcgcttggagtgtttgaagttcatgggcgaagaattcgggacttcagaccc
aaatggccctcatcttcattcgtttcatctgatggattaattacagccatggcctaccgc
ttgccacatgtggtcatgggtgataaaactggtaacattcgctggtgggatgtaacaact
ggacattcttcatcttttaacacacacagagaaggaatcaggcgaatcaaattttcccct
gtagtttccggggaccacagcagaggacgtatagctgttcttttttatgataatacattt
tctatatttgatcttgattcacaggatcccttggctaattccattttgcaacatcaattt
ccagggacccttgtattggaacttgattggttacctctacgaatagatagaaaagatcct
ctagttttatgtattgcaggagctgatagtagctttcgtcttgttgagatcataattaat
gaaaagaagcatggctatggacccaagacagttagggaaagatttcggccaatgcctata
tgttctcctatgttacttcccactccacatgcgttggcattacggatgatcttgcagtta
ggtgtaaagccctcctggttaagtaagagacctcaactcatgtctggattttctgcagct
ggtggtgaccttcggagtcacatgattgatttaccacctgttggtgactctgtggtgcca
gaaatgcttctcaaggttcttgatccttatcgtatcgaaggttgcatccttgatgatgcg
agggcaaaattatattcaaagttagtacataaaggctctgctttgaggtttgcctttgct
gctgcaatttttggcgaatcatctgaagccctcttttggctacagttgcctagtgctctc
aatcatctgatgaataagttagccaataaatctcaccagagaggcaaatcctctgcatct
aatgtggatcttgatgaagcttcaatgctgaataggatatcctcaaagggaaaatcagtg
ccaagaactgggaagaaaaaagcatttggtcaaggccaacttatggcaatggctttcaaa
caagaagagttatgggaaagtgcaaatgaacgcattccttggcatgaaaaattggatggg
gaagaggttaatcaaaatcgtgtgcatgagcttgtatctgttggaaacttagaagccact
gttagtttactgctttccactcctccagagagctcttacttctatgcaaatgctctacgt
gccgttgcactttcttcagctgtgtcaaaatcgcttttagaactggctgtcaaggttgtt
gctgccaacatggtgagaactgaccggtcactgtctggaactcatcttctctgcgctgta
ggaaaatatcaagaagcttgttctcagcttcaagatgctggatgctggacggatgctgca
actttagctgcgacacatttaaaaggatctgattatgctagggtgcttctaaggtgggct
aatcatgtcttccttagcgaacataacatctggagggcgctgatattgtacgttgcagct
ggtgcactgcaagaggcactggctgcacttcgtgaatcgcagcaacctgatactgcagcc
atgttcgtcctggcttgtcgagaaatacatgcagaattcatctccaatttagaacattca
gacgatgagtcggattctcgttttttgaaggaaaaactccttaagttgcccgggttggac
ccggaaaacgaagatgttatcgcagtctgtgaatattatggacaataccagagaaaactg
gtgcacctctgcatggactccatgccgtattctgactga
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