Cucurbita pepo subsp. pepo (vegetable marrow): 111793046
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Entry
111793046 CDS
T05351
Name
(RefSeq) polygalacturonase At1g48100
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00040
Pentose and glucuronate interconversions
cpep01100
Metabolic pathways
Module
cpep_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111793046
Enzymes [BR:
cpep01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
111793046
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
111793046
NCBI-ProteinID:
XP_023530504
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Position
LG04:5882448..5885507
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AA seq
465 aa
AA seq
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MKMCGKNLKCLATIAFICVFVWSFSLENCHGREGRRWGAHRKTGGYRHHHVHVDSEDVVG
ASLASEGGSGSFNVVDFGAKGDGKEDDTKAFQAAWESACNAEGSMVEVPSGYEFLVGPIS
FSGPNCQPNIVFQLDGRIIAPTSPSAWGSGLLQWIEFTKLKGITVKGTGTIDGQGSVWWS
DNSPTDDSTDENLDKESSGGRLPRTKPTALRFYGSDGVTVTGITIQNSQQAHLKFDSCTS
VQVSSLTISSPGDSPNTDGIHLQNSQNVIISNSNLACGDDCISIQTGSSSIYIHDVNCGP
GHGISIGGLGRDQTKACVSNVTVRDVKLQNTMNGVRIKTWQGGSGSVQGILFSNIQVSDV
GTPVMIDQYYCDGGRCHNGSSAVAISGVNYVNIRGTYTSTPVHLACSDSLPCTGVTLDTI
QLEGSSRSNEPFCWKAYGELKTSTVPPIDCLQSGNPSKAQAHGFC
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgtgtgggaagaatttaaaatgtcttgcaactattgctttcatttgtgttttt
gtttggtcgtttagtttggaaaattgccatgggagagaaggcaggcgttggggggcacat
agaaaaactggaggctaccgccaccaccatgttcatgtggatagtgaggatgttgtggga
gcctcactagcaagtgaaggtggttctggcagttttaatgtggtggactttggagctaaa
ggcgatggaaaggaagatgacactaaggcatttcaggcagcttgggaatcagcttgcaat
gcagagggatcaatggtggaggttccctcaggttatgaatttctcgttggccccatttcg
ttctctggtcctaattgccaaccaaacattgtgtttcagttggatggcagaatcattgct
cctacaagccctagtgcttggggttcaggtctcttgcaatggattgaattcactaaactt
aaagggataacagtgaaaggtacaggtactattgatggacaaggctccgtttggtggagc
gacaactcgcccacagacgattctactgacgaaaatttggacaaggaaagcagtggcgga
agacttccaagaaccaaaccaacagcacttaggttctacggaagtgatggagtgacagtc
actggaataaccatccaaaacagccaacaggctcacctgaaatttgatagttgcacatca
gttcaggtttcttcattaaccatttcatcgcctggtgacagcccaaacacggacggaatt
cacttgcagaactcccagaatgtgatcatttcgaacagcaatctagcttgtggagatgat
tgtatatccatacaaactggaagctcgtccatatacatacacgatgtgaactgtgggcca
ggccatggaattagcattggaggactaggacgtgatcaaacaaaagcatgtgtttccaat
gtcaccgtccgtgatgtcaaactgcagaacacaatgaatggggtcagaataaaaacatgg
cagggtggttcaggctcagtacagggaatactgttctcaaacattcaagtttcagacgtt
gggactccagtaatgatagaccaatactactgcgatgggggtagatgccataatggatct
tctgcagtagcaatttcaggagtaaattatgtaaacattaggggaacatacacttcaacg
ccggtccatttagcctgcagtgacagtcttccctgcactggtgtgacattagacaccatt
cagcttgaggggagcagccgctcaaatgaaccattctgttggaaggcatacggtgaacta
aaaacctccactgtccctcccatcgactgcttgcagtctggaaatccatcgaaagcccag
gctcacggtttctgctaa
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