Cucurbita pepo subsp. pepo (vegetable marrow): 111793205
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Entry
111793205 CDS
T05351
Name
(RefSeq) elongation factor Tu, chloroplastic-like
KO
K02358
elongation factor Tu
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
111793205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
cpep03012
]
111793205
03029 Mitochondrial biogenesis [BR:
cpep03029
]
111793205
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpep04147
]
111793205
Translation factors [BR:
cpep03012
]
Eukaryotic type
Elongation factors
111793205
Prokaryotic type
111793205
Mitochondrial biogenesis [BR:
cpep03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
111793205
Exosome [BR:
cpep04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111793205
Exosomal proteins of breast cancer cells
111793205
Exosomal proteins of colorectal cancer cells
111793205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
GTP_EFTU_D2
EF-G_D2
MMR_HSR1
GTP-eEF1A_C
CbiA
cobW
Cas9_b_hairpin
RsgA_GTPase
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
111793205
NCBI-ProteinID:
XP_023530750
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Position
LG04:complement(12368626..12370506)
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AA seq
474 aa
AA seq
DB search
MAAISLASAPTSTSSKLAFPHPSPSPFSSKPSSITKLSSSFLNPSSLRPLTFTSSSSATV
KRSPSFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEIDAAPE
ERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQ
TKEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDDVPIIAGSA
LLALEALMANPNIVRGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVFSITGRG
TVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKA
DIQRGMVLAKPGTITPHTKFVAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTSI
MNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggcggccatttccttagcttccgctcccacttccacttcctccaagctcgctttcccg
catccctctccttcgcccttttcctccaaaccctcctctatcaccaagctttcttcctct
ttcttgaatccttcttctcttcgccctctaaccttcacttcttcctcttccgccactgtt
aaacgctctccttccttcactattcgcgccgctcgtggcaaattcgagaggaagaaaccc
catgtcaatatcggcacaattgggcatgtcgaccatggtaagaccactctcaccgccgct
ttaaccatggctttgagcaaagccccaaagaaatatgacgaaattgacgccgcacctgaa
gagcgagctcggggtattacgattaacaccgccaccgttgagtacgagactgagagccga
cattacgcccacgttgattgccctggccatgctgattacgtcaagaacatgattactggt
gctgctcaaatggatggcgcaattttggttgtttcgggcgctgatggcccaatgccacaa
acgaaggagcatattttgttggctaagcaagtgggtgtccccaatatggtggtgtttctc
aacaagaaggatcaagttgatgacgaggagcttctggagcttgtggaattggagatgcgt
gagttgctttcgtcttatgaatttccaggtgatgatgtcccaattattgctggttctgct
ttgttagctttggaagctctaatggctaaccccaatattgttagaggcgaaaatgaatgg
gtggataaaatttttgaacttatggatgctgttgatagttatattcccatacccgaaaga
caaacagatcttccatttttgcttgctgttgaagatgtgttctctattactggtcgtggt
actgtggcgacagggcgtgtcgagaggggtaccgttagggttggagagacagtggatatt
gtaggattgagggaaactagaaacacaacagtaacaggggtggagatgtttcagaaaatt
cttgatgaagctttggctggggataatgtaggattgttgcttagaggtgttcaaaaggct
gatatccagagagggatggttttggccaagcctggcaccatcaccccacacaccaagttt
gttgcagttgtgtatgtgttgaagaaggaagagggtggtagacattcaccctttttcgcc
ggttaccgaccacaattttacatgaggacgaccgatgtcaccggtaaggtgacttcgatt
atgaatgacaaggacgaggagtcaaaaatggttatgccaggagaccgagtgaaaatggtt
gttgaactgataatgccagtggcttgtgaacaaggaatgaggtttgccatcagagaaggt
ggaaagactgttggagctggtgtgatccaatctataatcgagtga
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