KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111793271
Entry
111793271         CDS       T05351                                 
Name
(RefSeq) glycine-rich RNA-binding protein 2, mitochondrial-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111793271
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpep03019]
    111793271
   03041 Spliceosome [BR:cpep03041]
    111793271
Messenger RNA biogenesis [BR:cpep03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     111793271
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     111793271
Spliceosome [BR:cpep03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    111793271
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_5
Other DBs
NCBI-GeneID: 111793271
NCBI-ProteinID: XP_023530847
LinkDB
Position
LG04:11640009..11642682
AA seq 313 aa
MAFLSKVGNILRQGANKRIGSDLQASSLSICQAVRWMSSMQSSKLFVGGISFSTDDQSLR
EAFTKYGEVVEARIIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN
DRSRGVGGGGYGGGGGYGGGGYGGGGAGGYGGGGAGGYGGGGAGGYGGGGSGGYGDGSGG
FSTTGYSSGGNYTNNFGGGSQGSGGNYGNEFASDSRGSVGTGGGFGGNDAGYNASNFSGG
DSGNYNVSGGGGDYFSNRGSEESSGFGGFTGGDQFSSKETDTMNAPGSGLGEQLEGNDRD
EDDDDANDFAKRA
NT seq 942 nt   +upstreamnt  +downstreamnt
atggctttcctaagtaaggttggaaatattctaaggcagggtgcaaataagaggattgga
tcggatttgcaggcttccagtttgtctatctgtcaagctgtacgatggatgtcttccatg
caaagttcaaaactttttgtcggaggtatttcattcagcactgatgatcaaagtctgagg
gaagcctttactaaatatggggaagtagttgaagctaggatcattgtggaccgcgaaact
ggaagatctagaggatttggatttgtgacttatacctccagtgaggaggcctctagtgcc
atccaggcattggatggacaggatcttcatggtcgtcgcgttagggtgaattatgctaat
gatagaagccgtggtgtgggtggtggcggctatggtggtggtggtggctatggtggcggc
ggctatggtggcggtggtgctgggggctatggtggcggtggtgctgggggctatggtggc
ggtggtgctgggggatatggcggtggtgggagtggaggttatggtgatggtagtggtgga
ttctccacgacaggatatagttccggtggtaactatacgaacaattttggcggtggtagc
caaggaagtggaggaaactatggcaacgagtttgccagtgacagccgtggaagtgttggc
acaggtggtggctttggtgggaatgatgctggctacaacgccagcaatttttctggtgga
gacagtggaaactataacgtcagtggcgggggcggcgactatttttccaaccgcgggtct
gaagaaagctctggttttggaggatttaccggtggggatcaatttagcagcaaagaaaca
gacaccatgaatgcacctggaagtggcctaggggagcaactcgaaggaaatgatagagac
gaagacgacgacgacgcaaatgactttgctaaaagagcctga

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