Cucurbita pepo subsp. pepo (vegetable marrow): 111793356
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Entry
111793356 CDS
T05351
Name
(RefSeq) two-component response regulator ORR24-like
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111793356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpep03000
]
111793356
Transcription factors [BR:
cpep03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
111793356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
111793356
NCBI-ProteinID:
XP_023530968
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Position
LG04:10690900..10692382
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AA seq
344 aa
AA seq
DB search
MDGFKILEIVRQGIDIPVVMVSANEQLEMVKRGVMEGAEAYLLKPVSFQELRNIWQHVLR
KRCRKRPNPDVMEQEQEQEQHKPIISHERVTVIDKEDDAIDKNMNIDSNHFDSCSSSKKK
PRVSWTKELHERFVVAYEQLGEKERVPNNILKLMNDPRLSRENVASHLQKHRDMLRKKAT
GAGKLVGKKNCYDRNSIKASKIQNSMSQRNNVSTIDQFQFSNLGRSSMEELEGSKNYYPV
PEFKWFNNFASNNLMSKPCDQYLGFGPSNNMNSNYPQSFGNCPMDNMGEIPEASGHLGWG
FPNNNTTSGQCSQMQLVKGNSHVSLLMDDELGDIFKQFQSEEAF
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggatgggttcaagatccttgagattgttcgtcaaggaatcgacattcctgttgttatg
gtgtcagcaaacgagcaattggagatggtgaagaggggtgttatggagggagctgaggcc
tatttactgaaaccagttagcttccaagaattgaggaatatttggcaacacgtcttgcgg
aaaagatgtcggaaaagaccaaaccctgatgttatggaacaagaacaagaacaagaacaa
cacaaacccattatctctcatgaaagggtcacagtaatcgacaaggaagatgatgcgatt
gataagaacatgaatatagattccaatcactttgattcatgttcatcttctaagaagaag
cctcgagtttcttggacaaaggaattgcatgaaagatttgttgtagcttatgagcaattg
ggagaaaaggagagagtcccaaataacatattgaagctcatgaacgatccacgtttatca
cgagaaaacgtggccagtcatcttcagaaacacagagatatgctgaggaagaaggcaacc
ggagcaggaaaattggttggcaagaagaactgctacgatagaaattcaattaaggcgtca
aaaatccagaattcgatgagccaaagaaacaatgtttcaacaattgaccaatttcagttc
tccaatctgggaagatcatcaatggaagaacttgaaggaagtaaaaattactatccggtg
cctgaattcaaatggttcaataattttgcatccaataatttgatgtcaaaaccatgtgac
caatacttaggattcggtccaagtaacaacatgaattcaaattaccctcaaagttttgga
aattgcccgatggataatatgggagaaattccagaagcatcagggcatcttggctgggga
tttcccaacaataacactacttcgggacaatgttctcaaatgcaattggttaagggaaat
tcccacgtcagcttattaatggatgacgaactcggtgatattttcaaacagtttcaaagt
gaagaagctttctag
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