Cucurbita pepo subsp. pepo (vegetable marrow): 111793434
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Entry
111793434 CDS
T05351
Name
(RefSeq) zinc finger protein NUTCRACKER
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpep03000
]
111793434
Transcription factors [BR:
cpep03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
111793434
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
C2H2-2nd_BIRD-IDD
C2CH-4th_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_STOP2_C
zf-C2H2_jaz
zf-met
Mito_fiss_reg
Motif
Other DBs
NCBI-GeneID:
111793434
NCBI-ProteinID:
XP_023531072
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Position
LG04:complement(7011655..7014748)
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AA seq
438 aa
AA seq
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MSEEQTISNAFICSLPTLGSNNNPPVLKKKRNLPGNPDPKAEVVALSPKTLMATNRFLCD
ICGKGFQRDQNLQLHRRGHNLPWKLKQRSNSNKEPRKRVYVCPEKSCVHHHPSRALGDLT
GIKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTKEYKCDCGTPFSRRDSYVTHR
AYCMALAEETARLNAAASTMNTADNGYHFLRPNTNPHQYFPSSTFFRQDHENSQMFLNNN
VNSLTPTIAFPFWMPNSSPQDNNFHHPLAPPPLPPPPPPPPPTATTSCLLSVPSLYSHEE
QANQAMASSSAAANMSATVLLQKAAEMAVTSSTTTDPSSLMASFGLKFSATTDGKALFSG
LYGSMNSNSIPSCCSLENGGDHQDSAASNLIQMYPAAKRIRHTVSEESVTGGEGETRDFL
GVGIPTICHHPSAVNGWM
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagagcaaacaatttcaaatgctttcatttgcagcttgccaacacttggatca
aacaacaaccctcctgttcttaagaagaagaggaatctccccggaaatccagatccgaaa
gcggaagttgtggcattgtcgccgaagaccctaatggcgacgaaccgattcttgtgtgac
atatgtgggaagggttttcagagggatcagaacctacagctgcatagaagaggacacaat
cttccatggaagctgaagcaaagaagcaacagcaacaaagagccaaggaagagagtttat
gtttgtccagagaagagctgtgtgcaccaccatccttcaagggcgcttggagacctcaca
ggcattaaaaagcacttttgcaggaagcatggcgagaagaagtggaagtgcgagaagtgc
tccaagaaatatgctgtgcagtcagattggaaagcacactccaaaacttgtggcaccaaa
gagtataaatgtgactgtggaactccattttcaaggagagatagctatgtaactcacaga
gcatactgcatggccttagcagaggaaacagcaagactaaacgcagcagcatcaactatg
aacacagctgacaacggctaccacttcctaagacccaacacaaatcctcaccaatacttc
ccctcctccacctttttcagacaagatcatgaaaattctcaaatgttcctcaacaacaac
gttaattccctcacacccacaatagcattccctttttggatgccaaattcttccccacaa
gacaataatttccatcacccacttgcaccaccaccactaccaccgccgccaccaccacca
ccaccaacagcaacaacaagctgtcttctttcagttccttccttgtacagccacgaagaa
caagccaatcaagcaatggcatcatcatcagcagcagccaacatgtcagctactgttctg
ctgcaaaaggctgctgaaatggcagtgacaagctccacaacaacagacccatcatcatta
atggcaagttttgggttgaaattcagtgccacaactgatgggaaagccttgttttcaggg
ctttatggctcaatgaactcaaattccattcctagttgttgcagccttgaaaatggtggc
gatcatcaagactctgctgctagtaacttgatccaaatgtaccctgctgcaaagagaatt
agacacactgttagtgaagaaagtgtcacgggtggagaaggagaaacaagggatttcttg
ggtgtgggaatccccaccatatgccatcatccatcagcagtgaatggatggatgtga
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