Cucurbita pepo subsp. pepo (vegetable marrow): 111793538
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Entry
111793538 CDS
T05351
Name
(RefSeq) multisubstrate pseudouridine synthase 7
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpep03016
]
111793538
Enzymes [BR:
cpep01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
111793538
Transfer RNA biogenesis [BR:
cpep03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
111793538
Prokaryotic type
111793538
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
R3H_PUS7L
Motif
Other DBs
NCBI-GeneID:
111793538
NCBI-ProteinID:
XP_023531231
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Position
LG04:198320..210881
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AA seq
717 aa
AA seq
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MRWHRPGISYLCALKPYFLCKPFTITKCTNRSSSITVMAMKSIGESDVGILSYISSLPGF
RGILKQRYSDFIVNEVDTDGNVVHLTSLDAPPEIVSESKPMKVHGTSESYASEIELFRSL
AGASDAEILEAFLKQISSGVDDSISPIVFAPDTDKSHRTAVHNFFKKFNFLVTDTVDGPD
SSSKCVRVRVDSGLQNNRGRVSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDT
QEALGLIGKMLGIQTRSFGFAGTKDKRAITTQRVTVFKQHASRLAALNDRLIGIKLGNFS
YIQEGLLLGQLLGNRFTITLRGVVADSEDTIKASAEALGRHGFINYFGLQRFGSGSVPTH
LVGASLLRGEWKGAVNMILDPREGETNVIAEARNYYKESNDIDGTLKQLPRYLVAERAIL
QCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKYGIDKVVVGDLVYCKE
NHTATAAVQKSEENVDEDCGDANTYDSCHLEEICTLDLPTERNKLVKAVTAEDVQSGNFT
IDDVVLPLPGSRVIYPTNDIAEVYHDLAAKDSINLTETIHNVKEFSITNMTGSYRSVFQR
PKDYEWELISYVDRNLPLAESDLDNLLKSQSVEITKEEKMHDKSKDEDSLDSIEQSGSCK
KSNKLQANENENGEAAQDPQMALKLSFNLPTSSYATMAIRELLKTSTSVAFHKALNE
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgcggtggcaccggccagggatatcgtacctctgtgccctaaaaccctactttctctgt
aagcctttcaccattactaaatgcaccaacaggtcttcttcgattacagtcatggcgatg
aaatccataggcgaatcagatgtcggcattctcagttacatttcttctctccctggtttt
cgcggcattcttaagcaaaggtattctgacttcattgtgaacgaagttgacactgatggg
aatgttgttcatttgacgtcattggatgctcctccagagattgtctcagaaagcaaaccg
atgaaagttcacggtacaagtgagagttatgcttctgaaattgaattgtttagatctcta
gctggtgcttctgatgctgagattttggaagcttttcttaagcaaatcagctctggtgtg
gatgacagtatttcacctattgtatttgccccagatacagataaatctcatcgaacggct
gttcacaatttctttaagaaatttaatttccttgtgaccgatacggttgatggacctgat
tcttcatcaaaatgtgtccgtgtgagagtagattcaggattgcagaataaccgaggtcgg
gtctctaagaaacgaaaagaaaggggtgataaaccctttgacagtagaggatcagacaac
tggcccgaacatgttggcaagtttctcaggtttcatctttacaaggagaacaaagacaca
caagaggcattgggacttatagggaagatgctcggtatccagacgaggtcttttggtttt
gctggtactaaagataagcgcgccatcacaactcaaagggtaactgtatttaagcaacac
gcaagtagattagctgctcttaatgatcggttgattggtatcaagttgggtaacttcagc
tatatccaggaagggcttcttcttgggcagctcctgggtaacaggtttaccatcaccttg
cgaggagttgtagcagatagtgaagacaccatcaaagcatctgctgaagctttaggaagg
catggttttattaattactttggcttacagcgttttggaagtggttctgtaccaactcat
ctcgttggagcttcacttcttagaggagagtggaagggtgctgtcaatatgattcttgat
ccaagagaaggggaaaccaatgtaattgcggaggcaagaaactactacaaggaaagtaat
gatattgatgggacgttgaagcaattacctcgatatttagtagctgaaagggcaatactt
caatgtttgaagaagtgtcctgggaactatttgcaggctcttaaagctatacctagaact
ttgagaatgatgtatgtgcatagttaccaaagctatttatggaaccatgcagcaagtatg
agagtgcaaaaatacgggattgacaaagtggttgttggagacttagtatactgcaaagaa
aaccacactgcgacagctgcagttcaaaaatctgaagaaaatgttgacgaggactgtggt
gatgctaatacatatgattcttgtcatttagaggaaatatgcacgctagatcttccaaca
gaaagaaataagctcgtgaaggctgttactgcagaagatgtccaaagtggaaacttcact
attgatgatgttgtacttcccctgcctgggtcaagagtaatctatcccacaaatgatatt
gctgaagtttatcatgatttagctgctaaggattcaattaacttgacggagactattcat
aatgtaaaggaattttcaattaccaatatgactggaagctaccgtagcgtttttcaaaga
ccaaaggactatgagtgggaattgatctcatatgttgatcgtaatttacccctggcagag
agtgatttagataaccttttgaagtctcaaagtgttgaaattaccaaggaagaaaaaatg
catgataaatctaaagatgaagattcattggactccatagaacaatcagggtcctgtaaa
aagagtaataaacttcaagcaaatgaaaatgaaaatggggaagccgctcaggatccacag
atggctcttaagttgagctttaatctccctacgtcatcttatgctacgatggcaattaga
gaattgctgaaaacatcaacttctgttgctttccacaaagctttaaacgagtga
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