Cucurbita pepo subsp. pepo (vegetable marrow): 111793870
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Entry
111793870 CDS
T05351
Name
(RefSeq) elongator complex protein 3
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpep03016
]
111793870
Enzymes [BR:
cpep01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
111793870
Transfer RNA biogenesis [BR:
cpep03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
111793870
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GFIT
Motif
Pfam:
ELP3_N
Radical_SAM_C
Radical_SAM
Acetyltransf_7
Acetyltransf_10
Acetyltransf_1
FR47
Motif
Other DBs
NCBI-GeneID:
111793870
NCBI-ProteinID:
XP_023531702
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Position
LG04:12427303..12430828
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AA seq
564 aa
AA seq
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MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQNVDLNALKS
AACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA
TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD
KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETR
PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA
HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPE
QLVDIVARILALVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVRT
REAGIQDIHHKIKPEEVELVRRDYMANEGWETFLSYEDVRQDILVGLLRLRRCGRNTTCP
ELVGKCSIVRELHVYGTAVPVHGRDTEKLQHQGYGTLLMEEAERIARMEHRSTKIAVISG
VGTRHYYRKLGYELEGPYMVKSLD
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgcagtggtggcggaatcggctcggaaactacctcggcctggtcggggggga
ttcgaaggtcatgggttttccgaggaggaaggccgagttcgtgccattgctgagattgtt
aattccatggtcgacctttcacgaaaagggcaaaacgtcgatctgaacgctctgaaatcc
gctgcctgccggaaatatggccttgcccgggccccaaagcttgtcgagatgattgcggcg
cttcctgagtcggaccgcgaggcactgctgccgaagcttcgggccaagccggttcgaaca
gcctccggtatcgcagtcgtggcggttatgtctaaaccgcatcggtgccctcatattgct
acgacggggaatatttgtgtatactgccccggaggacctgattcggactttgagtacagt
actcaatcttacactggttatgagcccacaagcatgcgtgcaattcgtgcaagatacaat
ccatatgtccaggctagaagtcggatagatcaattgaagcgtttgggccatagtgttgat
aaggttgagttcatcttaatgggtgggactttcatgtcactgccagctgattatcgtgat
tactttataaggaatcttcatgatgctttgtcagggcatacttctgccaatgttgaagag
gcagttgcctactctgagcacagtgcagttaaatgtattggcatgacaatagaaacgagg
cctgattattgtcttggacctcacttgaggcaaatgctttcttatggttgtacacgcctg
gagattggagttcaaagtacatatgaggatgtagctcgagacactaacagagggcatact
gtagctgctgtggctgattgcttttgcttggcaaaggatgctggtttcaaggttgtagca
cacatgatgcctgatcttcctaatgttggggttgagagagacctggaaagttttcgggag
ttctttgagaacccttcatttagagcagatgggctcaaaatatatcccacgcttgtgatc
cgtggaactgggctctatgaactgtggaaaactggcaggtatagaaactatccaccagag
caacttgttgatattgtggcaagaatcctagctctggtacctccctggactcgagtatat
agagtacaacgggatatcccaatgcctttggttacttctggtgtagagaaaggaaatctt
cgagagctagctcttgctcgaatggatgatttgggcttgaaatgccgtgatgttcggaca
cgagaagctggaattcaggacattcatcacaagattaaacctgaagaagttgagcttgtc
cgtcgtgattatatggcaaatgaaggctgggaaacgtttctatcatatgaagatgttcgg
caggacattcttgttggtctgctccggctgagaagatgtggtcgcaacaccacttgtcct
gagctggttgggaagtgttccattgttcgtgaactccatgtgtatggaactgccgttcca
gttcatggacgtgataccgagaagctacagcaccagggttatggcacgcttttgatggag
gaggcagagcggatagctcgtatggagcatcgatcaacaaagattgctgttatatcaggc
gttggaacccgtcattattatagaaaattaggttacgaactagagggaccttacatggtg
aaaagcctggactga
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