Cucurbita pepo subsp. pepo (vegetable marrow): 111793945
Help
Entry
111793945 CDS
T05351
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00040
Pentose and glucuronate interconversions
cpep01100
Metabolic pathways
Module
cpep_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111793945
Enzymes [BR:
cpep01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
111793945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
111793945
NCBI-ProteinID:
XP_023531798
LinkDB
All DBs
Position
LG04:4837018..4838615
Genome browser
AA seq
393 aa
AA seq
DB search
MAIPRTSLVLFLVSMFLDSTFAASSSSYNVVSFGAKPDNQSDSTQAFQAAWAKACASTKS
ASIYVPRGRYYLRSVTFNGPCKNNAISMRIDGSLVAPSDFRVIGNLVAWIMFRHVDGVTI
SGGILDGQGTGLWACKNSTKACPNGATTLEFSNAKNIAITGLTSLNSQMFHVVVNDCQNF
KIKGLKIIASGDSPNTDGIHVEQSSNVTILNSHVGTGDDCISIGPGTSDMWIENIVCKPG
HGISIGSLGKNLEEAGVRNITVKKALFSHTQNGVRIKTWGKPSNGFATNILFQKIIMDNV
KNPIIIDQNYCPNHKDCSTQASGVKISNVTYQDIHGTSATQIAVKFDCSPTNPCVQIRLE
DINLTSRKNQTAQAVCSHVEGIATGLVEPTSCF
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggccattccaagaacctctcttgttcttttccttgtgtctatgtttctcgactcaacg
ttcgctgcttcatcctcatcgtacaatgtcgttagttttggagccaaacccgacaatcaa
tctgactcaacgcaagcatttcaagctgcatgggctaaagcatgtgcctccacgaaatca
gcttcaatttatgtcccgcgaggaagatattaccttcgtagcgtaacatttaatggacct
tgcaagaataatgctatctcgatgcgtattgatggcagcttggtagctccctcggacttt
cgagttattggtaacttagtagcttggattatgtttagacatgtcgacggagttactatc
tcgggtgggattcttgatggtcaaggaactggcttatgggcttgtaagaactcgacaaaa
gcttgtcctaatggagccacgacgcttgaattctcgaacgcaaaaaatatagcgattact
ggattaacatcgctcaatagccaaatgttccacgtagtcgttaatgattgtcaaaatttc
aaaatcaagggacttaaaatcatagcttctggcgatagtcccaacactgatgggattcat
gtagaacaatcctctaatgtgacgatactaaactctcacgtaggcactggggatgattgt
atatccatcggtccgggaacttctgatatgtggattgagaatattgtttgtaagccaggt
catggaataagcatcggaagtctcggaaagaaccttgaagaggctggggtccgaaacata
accgtgaaaaaagctttattttcacacactcaaaacggtgtgagaatcaagacatggggc
aaaccgagcaatggatttgctactaacattctcttccaaaagattataatggacaatgtc
aagaatccaatcattattgatcaaaattattgtccaaaccacaaagattgctcgacccag
gcttccggggttaaaatcagcaacgtgacgtaccaagacattcatggaacatcggccact
caaattgcagtcaagttcgattgcagtccaacgaacccatgtgttcaaataaggttggaa
gacataaaccttacttctaggaagaaccaaacagcccaagctgtatgtagccacgtagaa
gggattgccacaggtcttgtcgagcccactagttgcttctaa
DBGET
integrated database retrieval system
