Cucurbita pepo subsp. pepo (vegetable marrow): 111793968
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Entry
111793968 CDS
T05351
Name
(RefSeq) KH domain-containing protein HEN4-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111793968
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
111793968
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_5
MOEP19
Motif
Other DBs
NCBI-GeneID:
111793968
NCBI-ProteinID:
XP_023531829
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Position
LG04:complement(4278491..4284505)
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AA seq
666 aa
AA seq
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MGSNFPSLPVKRTVAYTAPVTGMGDSYIGLANGSSKSKRFKQPPPLIIPPGHVAFRMLCH
ASRIGGVIGKSGLVIKQLQQSTGAKIRVEEAPKESPDRIVTVIGPPALTSRVLLDQNPSE
NGVSVIEVEASKAQDALLKVFERILEVAAESEGVGIGAEVGVVSCRLLAEVAQVGSVIGK
GGKVVEKIRKESGCKIRVLTDKLPACAGPSDEMIEIEGDVLAIKKALLAVSRCLQDCPPS
EKMRMVASRPAEAVIHETLPDLHLDHILQRNSILPILPSNSSIFASGIHSFSTDSDVLSP
VDTEVTQQDVVFKILCANDRIGGVIGKGGTIIRALQNESGATVSVGPSVAGCDERLISIT
ASENIESRYSPAQKAVVLVFSRYVDVAIEKGQDMSSNKGASIVARLVVPSNQVGCVLGKG
GVIISEIRKVTGTNIRIISSDHVPKCAAESDEIVQISGEFSNVQDALYNVTGRLRDNLFS
NVLSNSGARNGAGSYIYPETSPYGRLRDPAPLARTTPVGASHSSFIQHTTQSTDDLGLSH
SLDSSSSPGLWASQSLSGISSRTISDAGRGLPPPSHRGGVHLGSGSKTALVTNTTVELIV
PEDVISLVYGENGTNLARLRQISGAMVTVHEPDPLTSNRLIVISGTPDETQAAQSLLHAF
ILTGSS
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtaattttccctctcttccagtgaagcgaactgtagcatacacggcgccggtc
actggaatgggcgactcatacataggtttggcgaatggttcatctaagtccaagaggttc
aagcaacctccgccgcttatcattcctccgggtcatgttgcgtttcgaatgctctgtcac
gcttcgagaatcggtggggttattgggaagtctgggcttgtgataaagcaacttcagcag
tctactggagcgaagattcgcgttgaggaagctccgaaagaatcgccggaccggattgtt
actgtgattgggccaccagcgcttacctccagggtgttgctggatcaaaaccctagcgag
aatggggtcagtgtgattgaagtcgaggcgtcgaaggcccaagacgcgcttctgaaggtg
ttcgagaggattttggaggttgcggccgagagcgagggcgttggaattggggctgaagtt
ggagttgtttcttgtagattgttggcggaggtggctcaggttgggtcagttataggcaag
ggggggaaggttgtggagaagataaggaaggagagtggctgtaagattcgggtcttgaca
gataagttgccggcatgtgcaggaccttcagacgagatgattgagatagaaggggatgtt
ttggctatcaagaaagcactccttgctgtatctcgatgtcttcaagactgtcctccaagt
gagaagatgaggatggttgcaagcagacctgctgaagcagtcatccacgagactttaccc
gatctacatttggatcatattttgcaaaggaattcaatactgcccatcttgccaagcaat
tcaagcatttttgcgtcaggaatccattcattttctacagattctgatgtgttatctcca
gtagacacggaagttacacagcaggatgttgtttttaagattctttgtgctaatgatagg
attgggggtgtcattggcaagggtggtacaattattagagcacttcagaatgaatctggt
gctactgtaagtgttggaccatcggtggctggttgtgatgagagactgataagtattact
gcatctgagaacattgaatcgcgatactcgccggcacaaaaggctgttgttcttgttttc
tcgagatatgtagatgtggcaattgagaagggacaagacatgagctcaaataagggagcg
tctatcgtggcacggcttgttgttccatcaaatcaagttggttgtgtgttgggaaaagga
ggtgttataatctccgaaatcaggaaggttacaggtacaaacataagaataatatcgagt
gatcatgtcccaaagtgtgctgcagaaagtgatgaaatagttcagatttcaggcgagttt
tcaaatgttcaagacgccttgtacaacgttacaggtcgactacgggataaccttttttct
aatgtcctaagtaattctggagcaaggaatggtgctggttcatatatatatcctgagacc
agcccttatggaagactaagggatcctgcacctctagcacgaacgactccagtcggcgct
tctcatagtagttttatacaacatacaactcaaagtacagatgacttgggtctttctcac
agtttagacagttcatcatcacctgggttatgggcatcacagtctttatctgggataagt
tctaggaccatatcagatgctggcaggggtttgccaccaccatcccataggggcggagta
catcttggcagcgggagcaagactgctttagttacgaacactactgtagaacttatagtt
cccgaagatgttatcagcttagtgtacggagagaatggcacaaatttggctcgtctaaga
cagatttctggtgcgatggtgacggtgcacgaacccgatcccctaacaagcaatcgactt
attgtcatatctgggacaccggacgaaacccaggctgcacaaagcctcctccacgccttc
atcctcaccggatcctcatga
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