Cucurbita pepo subsp. pepo (vegetable marrow): 111794021
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Entry
111794021 CDS
T05351
Name
(RefSeq) RNA pseudouridine synthase 7-like isoform X1
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpep03016
]
111794021
Enzymes [BR:
cpep01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
111794021
Transfer RNA biogenesis [BR:
cpep03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
111794021
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
111794021
NCBI-ProteinID:
XP_023531892
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Position
LG04:12625415..12629540
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AA seq
389 aa
AA seq
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MTSKRKRGEEGMGEGEIVWQTPANAPQRCDYIFHNGRRHVRPYYFEFIAHVKNRWAGKSI
VDLFTEEFKGRPYEYYIDAVKCGRIQVDGEMVPTSYIVKTSQKISHFLHRHEPPVMALEV
KILKEEADVLTVYKPASVPVHPCGQYRKNTVVGILQAEHGLAPLFPIHRLDRLVSGLLII
ARNASKADLFRQQIESGLVKKQYIARVVGMFPEEEQVVDVHINYNAREGRSTAEMVDSCM
DTMAKGKAAQTKFTCISSDGVHSIVLCEPVTGRTHQIRVHLQYTGYPIANDALYLTKVAS
GRSVEKTTADRAAAISACSTAHDIEEDCVSARKENSSEDFSIDPMCTNCPNLAPKGYDGE
EEGLWLHCVRYSGPGWIYECPYPEWASLK
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcaaaaggaaaaggggagaagagggcatgggagaaggagagatcgtatggcaa
accccagccaatgcccctcaacgatgcgattacatatttcacaatgggaggcggcacgtt
agaccttactacttcgagttcattgcccatgttaagaatcgatgggccggcaaatccatt
gtcgacttgtttactgaagagtttaaaggccgaccatacgagtactatattgatgcagtc
aaatgtggtcgaatacaagtcgatggggagatggtgcctacatcatatatagttaaaaca
tctcaaaagataagccatttcctgcacaggcatgaaccgcctgtaatggctttggaggtg
aaaattctcaaagaagaagcagatgtgctgacggtttacaagcctgcgtctgttccagtt
catccatgtggtcaatataggaagaacaccgttgttggcatacttcaggcagagcatggt
ttggcacctctatttcctatacatcgactagaccgtcttgtctcaggacttcttatcatt
gctagaaatgcatcgaaagctgatcttttcagacaacagattgagtctgggctggtgaag
aaacagtatattgcaagggtggtgggtatgtttccagaagaagagcaagtggtcgatgtt
cacataaactacaatgctcgagagggaaggagcacagcggagatggttgattcttgcatg
gatactatggcgaaggggaaggccgctcaaacaaagtttacttgcatcagttccgatgga
gtccatagcattgttttatgtgaaccggtcactggacgaactcatcaaatccgtgtgcat
ttgcagtacacagggtatcctattgccaacgatgcactgtaccttacaaaagtagcttct
ggtcgctccgtggaaaaaacaactgcagatagagctgctgcgatatctgcgtgttctaca
gcacatgatattgaagaagattgtgttagtgcacgcaaagaaaactcaagtgaagatttt
agcattgaccccatgtgcacaaactgtccaaatttggctccaaaaggatatgacggagaa
gaagagggattgtggctgcattgcgttcggtactccggaccaggatggatctacgaatgc
ccatatccagaatgggcttcacttaaatag
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