Cucurbita pepo subsp. pepo (vegetable marrow): 111794112
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Entry
111794112 CDS
T05351
Name
(RefSeq) tRNase Z TRZ2, chloroplastic
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpep03016
]
111794112
Enzymes [BR:
cpep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
111794112
Transfer RNA biogenesis [BR:
cpep03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
111794112
Prokaryotic type
111794112
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GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-GeneID:
111794112
NCBI-ProteinID:
XP_023532022
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Position
LG04:complement(7750257..7755878)
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AA seq
347 aa
AA seq
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MQISMAISPLTAPQIFPFHQPILQSPKPHKIALQRHGTPVNSFRDSGLLSTIGVEEEYRR
ARSQVNRKGVDLEGYSIEGISVGGQETCIIIPEFKCAFDIGRCPSRAIQQNFVFITHAHL
DHIGGLPMYVASRGLYSLSPPTVFVPPCIKEDVEKLLEIHRTMGQVELDVDLVALDVGDT
YEMRNNLVCRAFETNHVIPSQGYVIYSVRKKLKKQYMHLKGKQIEKLKKSGVEITDTILS
PEVAFTGDTRTDFMLDPRNADALRAKILITEATFLDEGVSIEHAREHGHTHIFEIIENAQ
WIRNKAILLTHFSSRYHIEDIRKAVSKLQSKVTAKVVPLTEGFKSVY
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatttccatggccatttcgccactcacagctcctcaaattttcccatttcatcaa
cccattttgcagtcaccgaaacctcacaaaattgctctccagagacatgggactcctgta
aattccttcagagattcgggtctcttatccacaatcggcgtcgaagaagaataccggaga
gctcggtcacaggttaatcgaaagggggtggatttagaagggtattcaatcgagggcatt
tcagttggtgggcaagaaacctgtattattattcctgaattcaagtgtgcatttgatatt
gggaggtgcccatctcgagccattcagcaaaactttgtattcatcactcacgcccacctt
gatcacattggtgggctaccaatgtacgtagctagtcgtggtttatatagtttaagtcct
cctacggtatttgtgcctccttgtattaaagaagacgtggagaaactacttgagattcac
aggaccatgggccaggtggagttggacgttgatctggttgcactagatgtaggagacaca
tatgaaatgcggaataaccttgtctgcagagcatttgaaacaaatcatgtgattccgagc
cagggttatgtcatttattcggttagaaaaaaattgaagaagcaatacatgcatcttaag
gggaaacagatcgagaagcttaagaaatctggcgtcgagattacagacaccatattgtcc
cctgaggtggccttcacaggagatacaaggacagattttatgcttgatccacgtaatgcc
gatgcattgagggcgaaaattctaataactgaggcaacttttctggatgaaggtgttagc
atagaacatgcaagggaacatggtcatactcacatatttgagatcattgaaaatgcacag
tggattcgaaacaaagctattctgcttacgcatttttcatcccgataccatatagaggac
atccggaaagcggtatcaaagttgcagtccaaggtgacggcaaaagtcgttcctctcact
gaaggtttcaagtcagtgtattaa
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