Cucurbita pepo subsp. pepo (vegetable marrow): 111794288
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Entry
111794288 CDS
T05351
Name
(RefSeq) histone acetyltransferase KAT6A-like
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03013
Nucleocytoplasmic transport
cpep03015
mRNA surveillance pathway
cpep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111794288
09122 Translation
03013 Nucleocytoplasmic transport
111794288
03015 mRNA surveillance pathway
111794288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111794288
03041 Spliceosome [BR:
cpep03041
]
111794288
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111794288
Spliceosome [BR:
cpep03041
]
Complex C
Other components
EJC/TREX
111794288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
NAPRTase
SAP_new25
Motif
Other DBs
NCBI-GeneID:
111794288
NCBI-ProteinID:
XP_023532042
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All DBs
Position
LG01:complement(4219927..4225470)
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AA seq
726 aa
AA seq
DB search
MSSKSKYPILENRPIDQWRVTELKDELKRRKLPIRGLKEDLIKRLDESLRIERENAEETN
GVDDAPPVTDTDNNQEHASIVSETTKETNEDATVIEKVDGDEVQVGKNGSTAAVDEGILQ
DGVSLNGSPRVEEGSAVHVTTLETNVTVAETVATEGALSVEGLQNMETKDNEDSKPQSEV
EESKSQLDSKDSKLQMEIEDTQPQLVDVNMEAQVKNENLKSQHANLGHDSSDPDNQVSEV
SPVIGSQVRTDSISTDSVTINEMIELKENISADHVKLELDVKQEMVEPSSSIVVPDAGES
HPMDVEEPPVNKNVEESPANRDVLEAPVNKDVVDSFVKDVVQPFVKEDVEEKHDIKDMIT
DLHEKHDDVDVGLSEKLNLDRSSGDDSIEDAMEIKTDSGNNPEEMGEKNVKVEGPISKEE
KFADIAVRGSTADKKNLDIESDVSSLPAEKRKILDQVGAGNTESVKRHRRWNAENLKIPE
PQNAVHTSTSNSKDILQSTAPKRNFSRSDSTASEDPSKERVVLPSPKPPTNSLRIDRFLR
PFTLKAVQELLSKTGSITSFWMDHIKTHCYVTYSSVEEAMKTRDAVYNLQWPPNGGRLLI
AEFVDPQEVKIRVGAPQTPTPATVAPPVSTMPPPKQPEPSPRLPRQQHAPPPSLPPPPPT
NNLPQSREQLPLPPPPALPDKVDTPIVTLDDLFRKTKATPRIYYLPLSDEQVQGKLAAGR
GKDIKQ
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaagtcgaaatatccaattctcgaaaaccgaccgattgatcagtggagggta
acggagttgaaagacgagcttaagagacggaaattgcccatcagaggtctgaaagaagat
ttgatcaaacggttggatgaatcacttcgaattgaaagggaaaatgccgaggaaaccaat
ggtgttgatgatgcccctccagttacagatactgacaataaccaagagcatgcatctatt
gtttctgaaacaacgaaagaaacaaatgaagatgctaccgtgattgagaaggtggatggt
gatgaagttcaggttgggaagaatggcagtactgcagctgtggacgaagggatacttcaa
gatggggttagtctcaatggttcacctagggtggaagaggggtcggctgtccatgttact
actctggaaactaacgttaccgtagctgaaactgtggcaactgaaggagcgttaagtgtg
gaaggattgcaaaacatggaaaccaaggataacgaggattcaaagccccagtcggaggtt
gaggaatccaagtcccagctggatagtaaggattcaaagcttcagatggaaattgaagat
acacagccccagcttgttgatgtgaatatggaggcccaggtgaagaatgagaatttgaag
tctcaacatgcaaatctcgggcacgactcttctgatccagacaaccaggtatctgaggtc
agccctgttatagggtctcaagtaagaactgattctatttctactgattctgtgacaatt
aatgaaatgattgaactaaaggaaaatatatctgctgaccatgtaaaattagaactagat
gttaagcaggagatggtggaaccatcatccagcattgttgtcccagatgctggcgaatca
catccaatggatgttgaagagccacctgtgaacaagaatgttgaagagtcacctgcaaac
agagatgttctggaggcacctgtgaacaaagatgttgtagattcttttgtgaaagatgtt
gtacagccctttgtgaaagaagatgttgaggagaaacatgatattaaggacatgattact
gatcttcatgaaaaacatgatgatgtagatgtggggttatctgaaaagctaaatttagat
agaagttctggggatgattcaatagaagatgctatggagattaaaaccgattcagggaat
aatcctgaagaaatgggagagaagaatgtaaaagttgagggccctatatccaaagaggaa
aagtttgcagacattgcagtgcgaggctcaactgcagacaagaagaatcttgatatagag
agtgacgtttcatctttgcctgctgaaaaaagaaagatacttgatcaagttggggctgga
aatactgagtccgtaaagagacatcgtaggtggaatgccgaaaacctcaaaattccagag
ccccaaaatgctgttcatacatcgactagtaattcaaaggacattcttcaatccactgct
ccaaaacgcaacttttccagatctgactccacagctagtgaagatccatcgaaggaacgt
gttgttctaccatcaccaaaacctcccacaaattcactaagaatcgatcgttttctgcgt
ccatttaccctcaaagctgtgcaagaacttctgagtaagactggtagtatcaccagtttc
tggatggatcacatcaagacgcattgctatgtaacttactcgtcggtggaagaagccatg
aagaccagagatgctgtttacaatctgcaatggccaccaaatggtgggcgccttcttata
gctgagtttgttgatcctcaagaagtaaaaattcgagtgggagctccacagactcctaca
cctgcaacagttgctccaccggtctctaccatgcccccacccaagcaacctgagccttct
cctcgtctaccaaggcagcaacatgctccaccaccttctcttccaccacccccacccaca
aacaaccttcctcaatcaagggagcagcttccactcccacccccgcctgcccttcctgat
aaagttgacactcctattgtcaccttggatgacctcttcaggaagaccaaagcaactcct
cgcatctactatttacctttatccgatgaacaggtgcagggaaaacttgcagcaggaagg
ggaaaggacattaaacagtaa
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