Cucurbita pepo subsp. pepo (vegetable marrow): 111794314
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Entry
111794314 CDS
T05351
Name
(RefSeq) autophagy-related protein 18c-like
KO
K22991
WD repeat-containing protein 45
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111794314
Membrane trafficking [BR:
cpep04131
]
Autophagy
Other autophagy associated proteins
Others
111794314
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_WDHD1_1st
WD40_Prp19
WD40
Beta-prop_Vps41
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_2nd
BCAS3_WD40
ANAPC4_WD40
Beta-prop_EML
WDR55
Motif
Other DBs
NCBI-GeneID:
111794314
NCBI-ProteinID:
XP_023532044
LinkDB
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Position
LG01:20438952..20442940
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AA seq
398 aa
AA seq
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MASTQESSEIGASGSIDQKEQNGKSELELHSVFWNQDYSCFAAGTSCGFRIYNCDPFKET
FRRELGIGGFKIVEMLFRCNILALVGSGSNSQYPPNKVLIWDDYKSQCIGEFSFRSEIRA
VKLKREHFIVVLEHKIYVYTLMDVKLLHQIETVTNPRGLCCLSHHVNTFVLACPGVQRGQ
VHVEHFGLNMTKLFNAHDSHIACMTLTMDGLLLATASTKGTLIRIFNTLDGMLLQEVRRG
MDRAEIFSLALSPNVQWLAAASDKGTVHVFSLRVRVVGAGSSSDTNVIQGKTLFQQNSSN
ALDTLVPLNTGSNPSSSLSFMRGVLPRYFSSEWSFAQFHLPEATQYIAAFGSQNTIIVVG
MDGSFYKCSFDPVRGGEMLQQECIRFLKIEIGADRIDL
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtactcaggaatcctcagaaattggagcttccggatctattgaccaaaaagaa
caaaatggaaagagtgagctagaactacattcagtgttctggaatcaagattatagttgc
tttgctgctggtacaagctgcggatttcgtatttacaactgtgatcctttcaaggaaaca
tttagacgtgaattgggcattggtggatttaaaattgttgagatgctgtttcggtgcaac
attttggcacttgtgggcagtggaagtaattctcaatatccaccaaacaaagttttgata
tgggatgattataaaagtcaatgcattggtgaattttcatttaggtctgagattcgagct
gtaaaactgaagcgtgaacactttattgttgtcctcgagcataaaatatatgtgtacacg
ctgatggatgtcaaacttcttcatcagattgaaactgttacaaatccgagaggcctatgt
tgcctttcccaccatgtaaatacatttgtgctggcatgtcctggagttcaacgtggacag
gtccacgtcgagcactttgggctaaatatgacgaagttatttaatgctcatgattctcat
attgcatgcatgacgttgacaatggatggtctacttcttgcaactgctagcactaagggt
actttgataagaattttcaatacattggatggaatgctcttgcaagaggtacgaagagga
atggatagagcagaaatcttcagtcttgctctctcgccaaatgtccaatggttggcagca
gcaagtgataaaggcacggttcatgttttcagtcttcgagtgagagttgttggcgcaggt
tcatcttctgatacaaatgtaattcaggggaaaacactgttccagcaaaattcttctaat
gcacttgatactcttgttcctttgaatactggttcaaaccctagttcatcattatcattc
atgagaggggttttaccaagatacttcagttcagaatggtcgtttgctcagttccatttg
cctgaggcgacacagtatattgcagcatttggatctcaaaacactatcattgttgttggc
atggatgggagtttctacaagtgtagttttgatccagtgcgaggaggggaaatgttgcag
caggaatgcatccgtttcttgaagatagaaataggagctgatcggattgatctatag
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