KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111794330
Entry
111794330         CDS       T05351                                 
Name
(RefSeq) histone deacetylase 19-like isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03082  ATP-dependent chromatin remodeling
cpep03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    111794330
   03083 Polycomb repressive complex
    111794330
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cpep03036]
    111794330
Enzymes [BR:cpep01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     111794330
Chromosome and associated proteins [BR:cpep03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     111794330
   HDAC complexes
    Sin3A-HDAC complex
     111794330
    BRAF-HDAC complex
     111794330
    REST complex
     111794330
    SHIP complex
     111794330
    MiDAC complex
     111794330
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     111794330
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    111794330
  Chromatin remodeling factors
   NuRD complex
    111794330
SSDB
Motif
Pfam: Hist_deacetyl Peripla_BP_7
Other DBs
NCBI-GeneID: 111794330
NCBI-ProteinID: XP_023532048
LinkDB
Position
LG05:complement(9332494..9336656)
AA seq 493 aa
METGGNSLPSGPDGVKRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ
VFKPVPARDKVLCRFHADDYVAFLKSITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHKVCDIAVNWSGGLHHAKKCEASGFCYVNDIVLAILELLKHYERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDVGYGKGKYYSLNVPLDDGI
DDESYHFLFKPIMGKVMEVFKPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGMEVDDKMPQHEYYEYFGPDYTLHVAPSNMEN
KNTHQMLEEIQGKLLDYLSRLQHAPSVQFQERPPDTELPEADEDREDKDERRDPDSDMEV
DDERKPIPSRVKRETVESEIKDPEVNVDSTRGLEKAAAAEATSAKALDIGSLKIEDPGVK
LEETSKQNDQMLP
NT seq 1482 nt   +upstreamnt  +downstreamnt
atggagactggaggcaattcattaccatctgggcctgatggcgtgaagaggaaagtcagc
tatttctacgaccctgaggttgggaattactattatgggcaaggtcacccaatgaagccg
catcgcatccgaatgacgcatgcccttctcgctcattatggcttactccagcatatgcag
gttttcaagcctgttcctgctcgggataaagtcctttgcagatttcacgctgatgattat
gtggcgtttcttaaaagtattacccctgaaacgcagcaagaccagctgagacagcttaag
cgcttcaatgtcggtgaggactgtccggtctttgatggcctctactctttctgtcaaact
tatgctggtggatctgttggtggtgctgttaagttaaaccataaggtttgtgatattgct
gtcaattggtctggtgggctacaccatgcgaagaagtgcgaagcatctggattttgttat
gtcaatgatattgttctggcgatactggagcttcttaaacattatgagcgtgttttatat
gttgacatcgatatccaccatggagatggtgtggaggaggctttttacacaaccgacagg
gtcatgactgtatcattccacaaatttggagattattttcctggtacaggtgatataaga
gacgttggttatggaaaaggaaagtactactcccttaatgttcctttggacgatggaatt
gatgacgagagctatcatttcttgttcaaacctataatgggaaaagttatggaagttttt
aaacctggagctgttgttctccaatgtggggctgactctctttctggagataggcttgga
tgctttaacttgtcaataaaaggtcatgcagagtgtgttagatatatgagatcattcaat
gtgcctctattgttacttggtgggggtggctacaccatccgtaatgttgctcgatgctgg
tgctatgagacaggagttgcacttgggatggaggttgatgacaaaatgccacaacatgaa
tattacgagtatttcggtcctgattacactctgcatgttgctcccagtaatatggagaac
aaaaatacacaccaaatgttggaagaaatacaggggaagctgcttgattacctctcaagg
cttcagcatgcacccagtgttcagtttcaagaaagacctcctgataccgaactcccagag
gcggatgaagatcgggaggacaaggatgagagacgggatccagattcagatatggaagtt
gatgatgagagaaaacccatcccaagcagagttaaaagagaaacggttgagtctgaaatc
aaagatccggaagttaatgtcgatagtactagaggtttagaaaaagcagcagcagccgag
gctacaagcgcaaaggctttagacatcggttctctcaaaatcgaagacccaggcgtaaag
cttgaagaaaccagcaagcagaatgaccaaatgttaccctaa

DBGET integrated database retrieval system