Cucurbita pepo subsp. pepo (vegetable marrow): 111794343
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Entry
111794343 CDS
T05351
Name
(RefSeq) small nuclear ribonucleoprotein SmD1b-like
KO
K11087
small nuclear ribonucleoprotein D1
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111794343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpep03041
]
111794343
03032 DNA replication proteins [BR:
cpep03032
]
111794343
Spliceosome [BR:
cpep03041
]
Complex A
U1 snRNP components
Sm proteins
111794343
U2 snRNP components
111794343
Complex B
U1 snRNP components
111794343
U4/U6.U5 tri-snRNP components
111794343
Complex C
U2 snRNP components
111794343
DNA replication proteins [BR:
cpep03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
111794343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
EBNA2_Core
Gemin7
Gp138_C
Motif
Other DBs
NCBI-GeneID:
111794343
NCBI-ProteinID:
XP_023532066
LinkDB
All DBs
Position
LG05:complement(10801920..10805997)
Genome browser
AA seq
114 aa
AA seq
DB search
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPITMDHLSV
RGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGKPLGRGRGRGRGRGRGRGR
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgttaggtttttaatgaaactcaataatgagactgtctcaatcgagcttaaa
aatggaactgtggtccatggcaccatcacaggtgtggatattagcatgaatacacatttg
aaggctgtgaaacttaccctaaaggggaaaaatcccattaccatggatcatttaagtgtg
aggggtaacagcatcagatattatattctccctgacagcttgaatctcgagactttactt
gttgaagagacaaccagggtcaagcccaagaaaccaactgcagggaagcctttgggacgg
gggcgtggacgggggcgggggcgtggtcgggggcgagggcgctag
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