KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111794388
Entry
111794388         CDS       T05351                                 
Name
(RefSeq) THO complex subunit 7A-like
  KO
K13176  THO complex subunit 7
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03013  Nucleocytoplasmic transport
cpep03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111794388
  09122 Translation
   03013 Nucleocytoplasmic transport
    111794388
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpep03019]
    111794388
   03041 Spliceosome [BR:cpep03041]
    111794388
Messenger RNA biogenesis [BR:cpep03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     111794388
Spliceosome [BR:cpep03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    111794388
SSDB
Motif
Pfam: THOC7 APG6_N DUF1818
Other DBs
NCBI-GeneID: 111794388
NCBI-ProteinID: XP_023532127
LinkDB
Position
LG05
AA seq 241 aa
MALRGRKVSARGESMAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLLKKFTSFVLE
IEKDGNNYDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINRQILLS
QGDIEDLKKQLEESKIERKHKEECEAIRKLIAAQPPRSVTQKSIMELEKEIAALDVENTA
SSRMLELRKKQFALLLHVVDELQNTIEDEQKSLMEEIRITSEENKIGVDEASGGLEAMAV
D
NT seq 726 nt   +upstreamnt  +downstreamnt
atggcgctaagagggagaaaagtctctgctcgaggggaatcaatggcggcaaattatgct
tttggacctctcgaagatgatgttatcataaaacacaggcttctcacccggacaacgacc
accaggggggaacctccattgaagaagctcctgaagaagttcacttcctttgttcttgag
attgaaaaggatgggaataactacgatgactgcgagaagctatccagagctttcttacaa
gagctgtccacatttgaaattcctttgctcaagagtaaagcagttgtcgatgcgaacatt
agggaaaaagagagcttccatgagtttaaggatgagataaacaggcaaattttgttatct
cagggtgatattgaagatcttaagaagcagcttgaagaaagcaaaattgagaggaaacac
aaggaggagtgtgaggcaattaggaagcttatagcagcacagccacccaggtctgtgaca
caaaagagtattatggagttagagaaagagatcgcggcacttgatgtggagaacacagct
agttctaggatgctggagcttcgcaagaaacaatttgctcttctgttgcacgtggtggat
gagttgcaaaatacgatagaggatgaacagaagagtttaatggaggaaataagaatcaca
agtgaggagaataagatcggtgtagacgaggctagtggaggcctggaagccatggctgtc
gactga

DBGET integrated database retrieval system