KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111794476
Entry
111794476         CDS       T05351                                 
Name
(RefSeq) proliferating cell nuclear antigen-like
  KO
K04802  proliferating cell nuclear antigen
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03030  DNA replication
cpep03410  Base excision repair
cpep03420  Nucleotide excision repair
cpep03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    111794476
   03410 Base excision repair
    111794476
   03420 Nucleotide excision repair
    111794476
   03430 Mismatch repair
    111794476
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cpep03032]
    111794476
   03400 DNA repair and recombination proteins [BR:cpep03400]
    111794476
DNA replication proteins [BR:cpep03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    111794476
DNA repair and recombination proteins [BR:cpep03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     111794476
   MMR (mismatch excision repair)
    Other MMR factors
     111794476
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    111794476
SSDB
Motif
Pfam: PCNA_C PCNA_N Rad9
Other DBs
NCBI-GeneID: 111794476
NCBI-ProteinID: XP_023532278
LinkDB
Position
LG05:complement(6206907..6208424)
AA seq 254 aa
MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVTLVVLLLRAEAFELY
RCDRNISVGMNLNNMSKMLKCAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD
IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIGDIGSANI
VCSQNAAVAKPEEATVIELNEPVSLTFSLRYMNLFTKATPLSNTVTISLASELPAVVEYK
IAEMGHVRFYMDPS
NT seq 765 nt   +upstreamnt  +downstreamnt
atgttggaacttcatcttgttcagaattcgctcctcaagaaggtcttggagtcgatcaaa
gattttgtgaccgatgcaaacttccattattccgccactggatgctcgcttcaggccatg
gattcgagccatgttaccctggtggttcttctccttcgagcggaggcctttgaactatat
cgctgcgacagaaacatttccgtgggaatgaacttgaacaacatgtcgaaaatgctcaag
tgtgccggcaatgatgatgccattagaatcaaggctgatgacggcaatgatactatcact
ttcgtgtttgaaagccccacccaacgcaaggtttccaattttgagatgagattgatggac
atcgacagcgagctacttggaattccagatttagagcatcatgctattgttaaaatgcct
tccgttgagttcgctagaatttgcaaagatctcagcaacattggtgatactgttataatc
tctgtgacgagggaagatgtcacgttctcaacaataggtgatataggatctgcaaacatt
gtttgcagccagaacgctgctgtagccaagccagaagaagcaacagttatagagttaaac
gagccagtttctttgacattttctttgaggtatatgaatttattcaccaaggctacaccc
ctatctaatacagttaccatcagcctggcttctgagctacctgccgttgttgagtacaaa
atagcagagatgggacatgttagattttacatggatcccagttag

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