KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111794677
Entry
111794677         CDS       T05351                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    111794677
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cpep04121]
    111794677
   03036 Chromosome and associated proteins [BR:cpep03036]
    111794677
Enzymes [BR:cpep01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     111794677
Ubiquitin system [BR:cpep04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    111794677
Chromosome and associated proteins [BR:cpep03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     111794677
    Noncanonical PRC1 (PRC1.1)
     111794677
    Noncanonical PRC1 (PRC1.3/1.5)
     111794677
    Noncanonical PRC1 (PRC1.6)
     111794677
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-C3HC4_4 zf-RING_4 zf-rbx1 RAWUL zf-Nse zf-C3HC4_5 zf-RING_11 zf-RING_10 zf-RING_6
Other DBs
NCBI-GeneID: 111794677
NCBI-ProteinID: XP_023532552
LinkDB
Position
LG05:10363728..10370099
AA seq 483 aa
MPAHKRSWSDSLVGEELSDEQFSHQDAKQCRAERQPNTEVEEEEEEEEQKKPKEEAERVE
KQHKQLEEGTGARDSEESQSSSSEEKPEFIFVELSGIRKDVQCPICLGIIKKTRTVMECL
HRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAALYPDIDKYEEEELTFH
EEERTRNKQIQESIAQTFQRQSEALSKKRMLGKDMPGMILTRSRRNHRNVHLRRQNGRGD
ELLGYEDNEDEDDNSEGKDSSSADERCSKVRQRRKKRHSTVRSFQPSSSIASVDYGCTDG
CAESDLDMSRENRTVSPGLVLNSEMLGWGRGGVRSNTRYGNAGGLSNKGSRSGRLMKLVN
YLRGLEENNNELDVHILLISVDTENTPSLKQPHLQCRPSLTVKHLREYVSRKTPLPADDV
ELLLVKDRYGTSDAQSTPSSSIFNPLKYELQILGGEETLAGLQADCTYSRAHLILGYRWK
GRS
NT seq 1452 nt   +upstreamnt  +downstreamnt
atgcctgcacataaacgttcttggtcagacagccttgtcggagaagagcttagtgacgag
caattcagccatcaagatgccaagcaatgtcgagcagaacgacagccgaacactgaagta
gaagaagaagaagaggaggaggagcaaaagaaaccgaaggaggaagcagaacgagtagaa
aagcaacacaagcaattggaagaagggactggagcgagagattccgaagaaagccaatcc
tctagctctgaagagaaaccggaatttatttttgtggagctgtcaggcattcgaaaagat
gttcagtgcccaatttgtcttgggattattaagaaaacgcgaactgtaatggaatgcctg
caccggttctgtagagaatgcattgacaaatcaatgcggcttgggaacaacgaatgtcct
gcttgccgcacacattgtgccagtagacgttctttgagagatgatccaaattatgacgca
ctgattgccgccctatatccagatattgataaatatgaggaggaggaattaacatttcac
gaggaagaaaggactcgtaataaacagattcaggaatcaattgcgcagacctttcaacga
caatcagaagcactaagtaagaagcgtatgttgggcaaggatatgcctggtatgattcta
acaagatcacgtcgcaatcataggaatgttcatctacggagacaaaatggccgaggagat
gaactgttgggatatgaagataatgaagatgaagatgataatagtgagggcaaggattca
tcgtctgctgatgagagatgttcaaaagttaggcaaaggaggaagaagaggcattccact
gttcgatcctttcagccttcttcgtcaatagccagtgtagattatggatgcaccgatgga
tgtgctgaaagtgatttagatatgagcagagaaaatcgtacagtttctcctggtcttgtc
ttgaactctgaaatgctcggttgggggcgtggtggtgtacgtagtaacacacggtatggt
aatgctggtgggttgagcaataaaggttccaggagtggtcgattaatgaagttagtcaat
tacctgcgaggccttgaagaaaataacaatgagctagatgtccatatccttcttatttca
gtggatacagaaaatactccaagtttaaagcagccacatctccaatgccgtccaagtttg
actgtcaaacacttgcgtgaatatgtctcgcggaagacacctctcccagctgatgatgtt
gaattactgttggtaaaagatcgttatggcacgagcgatgctcaatcaaccccaagttcg
tcaatcttcaatccactcaagtatgagctacaaattttgggaggcgaagaaacattggca
ggacttcaagcagattgcacttatagtagggcgcacttgattcttggatatcgttggaag
gggcggagttaa

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