Cucurbita pepo subsp. pepo (vegetable marrow): 111794708
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Entry
111794708 CDS
T05351
Name
(RefSeq) ubiquitin-60S ribosomal protein L40
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03010
Ribosome
cpep04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
111794708
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111794708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cpep03011
]
111794708
04121 Ubiquitin system [BR:
cpep04121
]
111794708
Ribosome [BR:
cpep03011
]
Ribosomal proteins
Eukaryotes
Large subunit
111794708
Archaea
111794708
Ubiquitin system [BR:
cpep04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
111794708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
zf-C4pol
TBK1_ULD
DUF2604
Ubiquitin_5
UBL_UBAC1
Plexin_RBD
Dsc3_N
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
111794708
NCBI-ProteinID:
XP_023532590
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All DBs
Position
LG05:3528124..3529999
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AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ
LRPKKKIK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtcaaaaccctaacggggaagaccattacgctggaagtagagtccagc
gacactattgacaatgtcaaggcgaagatccaggacaaggagggtattcccccagaccag
caacgactgatctttgctggaaagcagctcgaggatggccgcactctcgccgactacaac
atccagaaagaatcaacacttcatctggttttaaggcttcgtggcggtatcattgaacca
tctttgatggcactggccaggaaatataaccaggacaagatgatctgccgcaaatgctat
gcacgcctgcatcctcgtgctgtcaactgccggaaaaagaaatgcggacacagcaatcag
ctgaggccaaagaagaaaatcaagtag
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