Cucurbita pepo subsp. pepo (vegetable marrow): 111794794
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Entry
111794794 CDS
T05351
Name
(RefSeq) E3 ubiquitin ligase BIG BROTHER-related-like isoform X1
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111794794
Enzymes [BR:
cpep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111794794
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111794794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf_RING_Vps8_fungal
zf-RING_16
zf_RING_Vps8
zf-RING_Vps41
VPS18_RING_C
zf-C3H2C3
zinc_ribbon_16
Prok-RING_4
zf-Nse
PHD_NSD
zf-C2H2_fungi_2
SUZ
PHD
zf-RING_10
zf-RING-like
DUF1272
Motif
Other DBs
NCBI-GeneID:
111794794
NCBI-ProteinID:
XP_023532704
LinkDB
All DBs
Position
LG01:1406293..1412550
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AA seq
321 aa
AA seq
DB search
MENEATTNATKLGFDGVKPPPTTATTASSDLEHNPNSNSSPSSADPHNETTGSDSTSRQS
ARTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEGGSYALDDEDGFGDLH
DHTESDGDDDDEEFDGTNVNDDDDVFDVHAREDGGEHINPSFELDPGNFLSDEAYARALQ
DSEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGEVVGTES
RGLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHSYHSECINNWL
KINKVCPVCSAEVSSTAGGSS
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgaagccaccactaacgccaccaaacttggttttgatggagtcaagccaccg
cccaccaccgccaccaccgcctcctccgaccttgaacacaaccctaattccaattcatcg
ccatcgtctgcagacccccacaatgagactactggatccgactccacttctcgccaatcc
gctagaactcccttcactaacctcaaccaggtcgatgctgaccttgccctcgcacgtacc
cttcaagaacaggaaagggcatacctgaggcttagaatggtgagtatggggattgatttt
ggaagttgggaaggtggaagttatgcattagatgacgaggacggttttggtgatctgcac
gatcatacagaatctgatggagatgatgatgatgaggagtttgatggaacaaatgtcaat
gatgacgacgatgtgtttgatgtgcatgctcgtgaagatggtggagagcatatcaacccc
agctttgaacttgatcctggtaattttttgagtgacgaggcttatgctagagccttacaa
gattctgaagacagggaaatggctgccagattgatggcccttgctggattacatgatgag
gaagcagatgacacggacgatcaaggcgaaaattctcaggatacgtgggaggatgttgac
ccagatgaactgtcgtacgaggagttgctcgcattgggtgaagtggtaggaactgagagc
agagggctatctgctgatacaattgcttccttaccctccataaacttcaaggcagggagc
ggtcagactggaagcaacgattcatgtgtcatttgtcggttggatttcgaggacgatgaa
accctgactgttctttcctgcaaacactcctaccattcggagtgcataaataattggtta
aaaataaacaaggtctgccctgtttgcagtgctgaagtgagttctacagctggtgggagc
agttaa
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integrated database retrieval system
