Cucurbita pepo subsp. pepo (vegetable marrow): 111794831
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Entry
111794831 CDS
T05351
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040
Spliceosome
cpep04141
Protein processing in endoplasmic reticulum
cpep04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111794831
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111794831
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111794831
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpep01009
]
111794831
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpep03041
]
111794831
03009 Ribosome biogenesis [BR:
cpep03009
]
111794831
03110 Chaperones and folding catalysts [BR:
cpep03110
]
111794831
04131 Membrane trafficking [BR:
cpep04131
]
111794831
03051 Proteasome [BR:
cpep03051
]
111794831
03029 Mitochondrial biogenesis [BR:
cpep03029
]
111794831
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpep04147
]
111794831
Protein phosphatases and associated proteins [BR:
cpep01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
111794831
Spliceosome [BR:
cpep03041
]
Complex B
Other components
Prp19 complex
111794831
Complex C
Prp19-CDC5 complex
111794831
Ribosome biogenesis [BR:
cpep03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
111794831
Chaperones and folding catalysts [BR:
cpep03110
]
Heat shock proteins
HSP70 / DNAK
111794831
Membrane trafficking [BR:
cpep04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
111794831
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
111794831
Proteasome [BR:
cpep03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
111794831
Mitochondrial biogenesis [BR:
cpep03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
111794831
Exosome [BR:
cpep04147
]
Exosomal proteins
Proteins found in most exosomes
111794831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
111794831
NCBI-ProteinID:
XP_023532762
LinkDB
All DBs
Position
LG01:complement(19373349..19376197)
Genome browser
AA seq
648 aa
AA seq
DB search
MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKN
QVAMNPLNTVFDAKRLIGRRFTDPTVQNDMKMWPFKVIAGPGDKPMIVVNYKGEEKQFAA
EEISSMVLTKMREIAEAYLGSSVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEP
TAAAIAYGLDKKASSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
NRLVNHFVQEFKRKHKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFY
TTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFF
NGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLI
PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI
TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKLVQEAEKFKAEDEEHKK
KVESKNALENYAYNMRNTIRDEKIGGKLAPADKKKIEDAVEQAIQWLDGNQLAESDEFED
KMKELESICNPIIAKMYQGGADMGGGAMDDDTPPSGGSGAGPKIEEVD
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaaagggcgagggtccggccatcggtatcgatctcggtactacttattcctgt
gttggagtttggcagcacgatcgtgttgagattatcgccaatgatcaggggaatcggaca
acgccgtcgtatgttgctttcactgacagcgagcggcttatcggcgatgctgcgaagaac
caggttgccatgaatcctctcaacaccgtcttcgatgcgaagcggttgattggaaggaga
ttcaccgatcccacggtccagaacgatatgaaaatgtggccgttcaaggtcatcgccggt
ccaggtgacaaacccatgattgttgtcaactacaaaggcgaagagaagcagttcgctgct
gaggaaatttcatccatggtcctcacgaaaatgcgtgagatagcagaagcttatctcggt
tcctccgtgaagaatgctgtcgttactgtccctgcttatttcaatgactctcagcgtcag
gccaccaaagacgcaggtgtcattgccggcctcaatgttatgaggatcatcaatgagccc
actgcggcagctatcgcttatggactagacaagaaagcatccagtgttggcgaaaagaat
gtactcatatttgatttaggtggaggaacatttgatgtctctcttctcacaattgaggag
ggtattttcgaagtgaaggcaactgccggtgacacccatctcggaggtgaggacttcgac
aacagattggttaaccatttcgttcaggaattcaagaggaagcataagaaggacatcagt
ggaaatccaagggctctgaggagattgaggactgcttgtgaaagggcgaagagaaccctt
tcatccactgctcaaactacaatcgagattgattctttgtatgaaggaattgatttctac
acaaccatcactcgtgctagattcgaggagctcaacatggacctgttccgaaagtgtatg
gagccagttgagaagtgtctgagagatgcaaagatggacaaaagcagtgtccatgatgtt
gtccttgttggtggctctacgaggattcctaaggtgcagcagctactgcaggatttcttc
aatggcaaggagctctgcaagagtatcaatcctgacgaggcagttgcttatggggctgct
gttcaagctgctatcttgagtggtgagggaaatgagaaagtgcaggatcttcttcttttg
gatgtcactcctctgtctcttggcttggagactgctggaggtgtgatgacagttttgatc
ccaaggaacaccaccatacccacaaagaaggagcaagtattttccacatactcagacaac
cagcctggtgttcttattcaggtctatgagggtgagagaacaagaaccagagataacaac
ttgctgggcaagtttgaactttccggcattcctccagctccaagaggtgttcctcagatc
actgtttgcttcgacatcgacgccaacggtattctaaatgtttctgcagaggataaaaca
actggacagaagaacaagatcaccattaccaacgacaaaggaaggttgtccaaagaggag
attgaaaaactggttcaagaagcagagaagttcaaggcggaagatgaggaacacaagaag
aaagttgaatcaaagaatgctttagagaactatgcatacaatatgaggaacacaatcaga
gatgaaaagataggtggtaagcttgccccagcagacaagaagaagattgaagatgcagtt
gaacaggccattcaatggctagacggcaaccagcttgcagagtccgacgaatttgaggac
aaaatgaaagaactcgaatctatttgcaaccccatcatagccaagatgtatcaaggtggg
gctgacatgggcggcggcgcaatggacgatgatactcctccatcaggcggcagtggcgct
ggtcctaagattgaggaagttgattaa
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