Cucurbita pepo subsp. pepo (vegetable marrow): 111794873
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Entry
111794873 CDS
T05351
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase MINDY-1-like isoform X1
KO
K01309
ubiquitin carboxyl-terminal hydrolase MINDY-1/2 [EC:
3.4.19.12
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111794873
Enzymes [BR:
cpep01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111794873
Ubiquitin system [BR:
cpep04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
111794873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY_DUB
Motif
Other DBs
NCBI-GeneID:
111794873
NCBI-ProteinID:
XP_023532814
LinkDB
All DBs
Position
LG05:1663169..1672648
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AA seq
706 aa
AA seq
DB search
MASPSSSEDPPNPPLEQQQQQPPKEKENECLYKTKTIQFLGRSTPIVLQNDNGPCPLLAI
CNVLLLRNNLNLGPDATEVSQEKLLSLVAERLIDSNSNVDNKDAGFVENQQQNIADAIDL
LPRLATGIDVNIRFRRIDDFEFTPECAIFDLLDIPLYHGWIVDPQDHDTASAIGSKSYNA
IMEELVALETQHMEDQCSNNPEDDCIDFVAATTATLGVPSPSLSKNCSFDESPRSVSDEQ
RMRKGDLEEEAELLRALKLSESVTPISMDNHGVVDSVGDTYATKLDEEPSPEKVSIIDAV
EKAIIKGICAAENNLNQQPSLSIEDSCRTSLSKSDDEGVSQEQVSSSPLKADVGKPLETV
ESEGHKICPDMLDNHETLIETDPISGRESSLVNENTDDISHKNDKTPLPAPFESVDHKPV
DKEDSSELSGLSSSVTCTDSADGKIQCVDVPGGLTSTVGSEPMYEGEECILDARSAVLAA
QEPVYEGEVVLAEQGCGSSINFPNVPAKDEISPKQGELIRNFLKNNASQLTFYGLFSLQD
GLKERELCVFFRNNHFSTMFKLDGQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNF
KEFKVESHSNESWDEHNAMASTADYLASIDATKHAGLDLNSDLQLAIALQQQEFEQQPQR
QNVQQPSSGGSSRLVVGPQVSKSSGKTPPSSSARTDAKPKEKCSVM
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgccttcttcctctgaagaccctccaaatccacccctggaacaacagcaacag
cagccgcccaaggaaaaggaaaatgaatgcctatacaagaccaaaactattcaatttctt
ggccgctctacgcctattgttctccagaacgataatggtccatgccctctcctcgccata
tgcaatgttctcttgttgcggaacaacttaaatctgggtccagatgcaacagaagtatcg
caggagaaattgttgtctctggtcgctgaacggttgattgattcaaatagtaatgttgat
aacaaagatgctggttttgttgagaatcaacaacagaacattgctgatgctattgatctg
ctaccacggctagcaacagggatagatgtaaatattaggtttaggaggattgatgatttt
gaattcactccagaatgcgccatttttgatttgttggatattcctctatatcatggttgg
atagttgatcctcaggatcatgatactgctagtgcaattggttccaaatcctacaacgct
attatggaggagcttgttgctctggaaacacagcacatggaggatcaatgtagtaataat
cctgaagatgattgtattgattttgtagctgcaacaacagcaacgcttggagtaccatct
ccaagtctttcgaaaaattgttcatttgatgaatcacctcgttcagtctctgatgagcaa
cgaatgagaaaaggggatcttgaagaagaggcagagttgttgagagccttgaaattgtct
gaatctgtaacaccaatctcaatggataatcatggtgttgtcgattccgtgggggacact
tatgccaccaaattggatgaggaaccatctcctgaaaaggtttcaatcatagatgccgtg
gagaaggccataataaaaggcatttgtgctgcagaaaataatcttaaccagcagcccagt
ttatccatcgaagattcttgcagaacctctttgagcaagagtgatgatgaaggcgtatca
caggagcaagtaagctcttcaccgttgaaggctgatgtgggaaagccccttgagactgtt
gagtctgaagggcataagatttgccctgacatgttggacaatcatgaaacattaattgag
actgatcccatttctggaagagagagttcattggtgaatgagaatactgacgatatttct
cacaagaatgataaaacccctttgccagctccttttgaatcagtcgatcataaaccggta
gataaggaagactcaagtgaactatcaggcctatcttcatctgttacctgtacagattca
gcagatggtaaaattcaatgtgttgatgtacctggcggtttgacttcaactgttggtagt
gagcccatgtatgaaggagaggaatgtatattggatgcacgaagtgcggttcttgcagct
caagagcctgtatatgaaggtgaagtggttcttgcagaacaaggttgtggaagctcaata
aatttcccaaatgtaccggcaaaggatgaaattagtccaaaacaaggggagctgatcagg
aatttcttaaagaacaatgcaagtcagctaacattttatggccttttctccttacaagat
ggacttaaagagcgtgaactttgtgtttttttccggaataatcacttcagcaccatgttt
aagcttgatggccagctttatctcttagctacagaccaaggttacattcatcaacctgat
ttggtgtgggaaaagctaaatgaggtgaatggagatactttatttatgacgggtaatttc
aaagaattcaaagtagaaagtcattctaatgaatcttgggatgaacataatgccatggca
agcactgcggattatcttgcaagtattgatgccaccaaacatgccggattggatttgaat
tctgacctgcaattagcaatagccctgcaacaacaggagtttgaacaacaaccacagcga
caaaatgtgcagcagccatcttctggcggcagttcaaggctggtcgtgggtcctcaggtg
tctaaaagtagtggaaaaaccccgccatcttcttccgcgaggaccgacgcaaaaccgaag
gaaaagtgcagtgtgatgtga
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