Cucurbita pepo subsp. pepo (vegetable marrow): 111794891
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Entry
111794891 CDS
T05351
Name
(RefSeq) cyclic nucleotide-gated ion channel 1 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
111794891
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpep04040
]
111794891
Ion channels [BR:
cpep04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
111794891
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
IQ_SCN5A_C
Motif
Other DBs
NCBI-GeneID:
111794891
NCBI-ProteinID:
XP_023532839
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Position
LG05:complement(3694629..3700861)
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AA seq
715 aa
AA seq
DB search
MTYLQEKIVRFPDRSSDKTSMGLYSADNTLNVGMNGTRADLVSEKPHKELETGSYRINRI
KKSLKSSSFNKFMSKSFGTRRQVLDPQGPFLQKWNKIFVLSCVIAVSLDPLFFYVPVMDD
DQKCLGLDKKMEITASVLRSFTDIFYILHIVLQFRTGFIAPSSRVFGRGVLVEDAWAIAK
RYLSSYFLIDILAVLPLPQVVILIIVPNMRGSRSLNTKDLLKFIVFFQYVPRFIRIYPLY
KEVTRTSVLTETAWAGAAFNLFLYMLASHVFGAFWYLFSIERETTCWQQACHNISCDSNT
LYCDVAVNLRNNSFLNISCPLVDGDEVKPPFDFGIFLDALNSRVVESMNFPQKFFYCFWW
GLRNLSSLGQNLQTSTYVWEILFAVFISISGLVLFSFLIGNMQTYLQSTTTRLEEMRVRR
RDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLL
MRVPIFEKMDEQLLDAMCDRLKPVLYTEESYIVREGDPVDEMIFIMRGKLLSVTTNGGRT
GFFNSEHLKAGDFCGEELLTWALDPHSSSNLPISTRTVRTLSEVEAFALKADDLKFVASQ
FRRLHSKQLRHTFRFYSQQWRTWAACFIQAAWRRYRRKKHEQALLEEENRLKDALAKTGG
SSPSLGATIYASRFAANILRTIRRTSSRKARIPERIPPMLLQKPAEPDFTSEENS
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgacttacctgcaggagaagattgtgcggtttccggaccggagttcagataaaacttca
atggggttatattctgcggataacactttaaatgtcggaatgaatgggacaagagctgac
ttagtttcagaaaagcctcacaaagaattggaaactggttcttacaggattaatagaatt
aagaaatccttgaaatcatcttctttcaataaatttatgtccaaaagttttggaacacga
agacaagtacttgatccacaggggccctttctccagaagtggaacaagatatttgtgttg
tcttgtgtgattgcagtctcgttggatcctttgttcttttatgtccctgtgatggacgat
gatcagaaatgtcttgggttggataagaagatggagattacggctagtgtgttacgttca
ttcaccgacatattttatatattacatattgttttgcaatttcgtacgggatttattgct
ccttcttctcgagtatttggaagaggtgttctagttgaagatgcttgggcaatagcaaag
agatatctgtcgtcatactttttgatcgacattcttgcagtcctcccacttccacaagta
gtgatcctgataattgttccaaacatgagaggctcgaggtcgttgaataccaaggacttg
ctgaaattcattgttttcttccaatacgtgcctcggtttattagaatctatcctttatat
aaagaagttacaagaacatctgtactcactgaaactgcatgggctggagctgcatttaac
ctctttctttacatgctggcaagtcatgtctttggagcattctggtacttgttttcgata
gaacgggaaactacatgctggcagcaggcctgtcacaatatcagctgtgattctaataca
ctatattgtgatgtggctgtcaatctacgaaataactcgtttttaaacatttcatgtcca
ctagtggatggagacgaagtcaaacctccttttgattttgggatatttcttgatgctctt
aattctcgtgttgttgagtcgatgaattttccacagaagttcttttactgtttctggtgg
ggtctgagaaatctaagttccctgggtcaaaatctccaaacaagcacatacgtatgggaa
attttgtttgctgttttcatctccatctctggcttagtcctgttttcatttctcattggg
aacatgcagacatatttgcaatccaccactacaagattggaagaaatgagggttagaagg
agagatgcagaacaatggatgtcccaccgtttactccctgagagcctccgggagcgaatc
aggaggtacgaacagtacaagtggcaggaaactagaggggttgatgaagagaatctggtt
cgaaatcttccgaaagatctcagaagggacataaaacgccatctctgcttgtctctgcta
atgagggtaccgatatttgaaaaaatggacgaacaactgctggatgctatgtgtgaccgt
ctcaagccagtactatacacagaggaaagttatatcgttcgggaaggagacccagtcgat
gagatgatcttcataatgcgtggcaagttattgtctgtaactacaaatggtggaagaact
ggtttctttaattctgaacacctcaaggcaggggatttctgtggagaagagctactgaca
tgggctctggatccacattcctcatccaatctaccaatttcaacaagaactgttcgaact
ctttcagaagttgaagcatttgctttgaaggcagatgacctaaagtttgtagcctcacag
ttccgtagacttcacagcaagcagctgcggcacactttcaggttttattcacagcaatgg
aggacatgggcagcgtgttttatacaagcagcgtggcgtcgatacagaagaaagaaacac
gaacaggctctgttggaagaagagaacaggttaaaagatgcattggccaagacaggtggg
agttctcctagtttaggtgctaccatctatgcatccagatttgcagctaacatcctaaga
acgattcgacgcacaagctcacgcaaggccaggattcccgagagaataccgcccatgttg
cttcagaaaccagcagagcccgactttacctctgaagagaatagttga
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