Cucurbita pepo subsp. pepo (vegetable marrow): 111795044
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Entry
111795044 CDS
T05351
Name
(RefSeq) transmembrane E3 ubiquitin-protein ligase 1-like isoform X1
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111795044
Enzymes [BR:
cpep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111795044
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111795044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-RING_5
zf-C3HC4
zf-C3HC4_3
zf-ANAPC11
PHD_NSD
zf-RING_UBOX
DUF2921
zf-RING_16
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
111795044
NCBI-ProteinID:
XP_023533040
LinkDB
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Position
LG05:10356985..10363047
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AA seq
570 aa
AA seq
DB search
MMSRDGFGCSEYQRSGFGCFSRTILALWAVHILVFQPVDGLRPLRERARSWGDEWLFVRK
DKSDLGPFSEWNITGTYRGSWSFLDSKNNSSRFPDFRNSNGNSIIELLSTPTKISGVHYV
QGVVIFHDVIDNEHDVSGVQIKVEGVYIWPFRQLRMVANSGKGGEYEQEVDSILSNPYHL
LGVFSSQVLQESPQDKMWKRSHSPIYEMEKHCNIEIAAQISHLSSAQNGNGERDHYHIEG
LMESPAVDDDGDCFSPLALNATSVNIEIYYNKAVNYTLMVTFVSFLQVLLLIRQMEHSNT
QSGAAKVSILMIGQQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLL
AIWKASRPMNNGEGWETMRRELSVLYSRFYGILLGGMFLMYELHRFMRPIIFLMYSFWIP
QIVTNVIRDSRKPLHIYYILGITITRLAIPLYVFGCPHNFMRIQPDKTWCICLGIFTFLQ
VAILLLQHYFGSRWFIPRQILPEKYSYYRRVDQNGNHTTDCVICMTTIDVSRPNDCMITP
CDHFFHSGCLQRWMDIKMECPTCRRLLPPV
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcagagatggttttggttgttcggagtaccagagaagtgggtttggatgtttt
tccagaactattttagctttgtgggctgttcatattttggtttttcagcctgtggatggt
ctgagaccattgcgggagagggctcgatcatggggcgatgagtggttgtttgtaagaaaa
gataagagtgatttgggtccattttctgaatggaatattacaggaacatatagaggcagt
tggagttttctagactccaagaataactcttccaggtttccagatttcagaaactccaat
ggcaattcaatcattgaattacttagtacaccaaccaaaatatctggtgttcattatgtt
cagggggttgttatttttcatgatgttattgataatgaacatgatgttagtggagttcaa
attaaggtcgagggtgtatatatttggccttttagacagcttcggatggtagctaacagt
ggaaagggaggagaatatgagcaagaagttgacagtatcttatccaatccttatcattta
cttggagttttctcctcccaggtgctccaagaatcaccacaggataagatgtggaaaaga
agccactcaccaatttatgaaatggagaagcattgcaatatcgaaatagcagctcaaatt
tcacatttatcttctgcacaaaatggaaacggagaacgtgaccattaccatatcgaagga
ttaatggagagtcctgcggtagacgatgatggagattgcttttctcccttggcgttaaat
gccacttctgtcaacattgaaatctactacaacaaagcagtgaattacaccttaatggtc
acttttgtctctttccttcaagtacttctcttaatccggcaaatggaacatagcaacact
caatctggtgctgccaaagtttcgatactaatgatcgggcaacaagctattatggatgct
tatctatgtctgctgcatctgacagcaggaatattagtcgaatcgttatttaatgctttt
gcaactgctgcgtttttcaagttcgtcgtgttctcgatttttgagatgagataccttctt
gcaatatggaaagccagcaggcctatgaacaatggcgaaggttgggaaacgatgagacgt
gaactttcggttctatatagccgtttctatggaatccttttgggaggcatgtttcttatg
tacgagttgcatcgttttatgagaccgattattttcctcatgtactcgttttggatacct
caaatagtcaccaacgttattcgtgactcgagaaaacctttgcatatatactacatctta
ggaataactataactcggctcgccattccgttatatgtcttcggctgcccccacaatttc
atgcgtattcagcctgataaaacttggtgcatctgtttgggcatctttacttttctccaa
gtcgccattcttcttcttcagcactatttcggatcccggtggttcatccctcgtcagatt
ctacccgagaaatacagctactaccggagggtagatcaaaatgggaatcataccacagat
tgtgtcatttgcatgaccaccatagatgtttcacgtcctaacgactgcatgattactcca
tgtgatcatttcttccattctggttgcttacaaagatggatggatataaagatggaatgc
ccgacatgtcgccgtttgctgccgcctgtctga
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