Cucurbita pepo subsp. pepo (vegetable marrow): 111795092
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Entry
111795092 CDS
T05351
Name
(RefSeq) LOW QUALITY PROTEIN: septin and tuftelin-interacting protein 1 homolog 1-like
KO
K13103
tuftelin-interacting protein 11
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpep03041
]
111795092
Spliceosome [BR:
cpep03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
111795092
Other components
Complex C specific factors
111795092
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GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
111795092
NCBI-ProteinID:
XP_023533102
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Position
LG05:complement(8211931..8215124)
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AA seq
870 aa
AA seq
DB search
MDDYQEMERFGMENDYDDGQWIGGEFYYRKRKEKRSQTKDDVLYGVFATGSDSDSDGFSS
RKRRKDRDLSRKPDLTKPVNFVSTGTVMPDQEIDKISKDGDTDNADDDRPGLGLGSSTSG
SGLGFTSSSSDRNRNGVKENGSTGDGDEDGDDLFLLTAFGRRIKEGAERRERERVKSQVE
KKSRAVAGTRKDSNLGNVGVFEKHTKGIGLKLLEKMGYKGGGLGRNEQGIVAPIEAKMRP
KNMGMGFNDFQEAPKIPVLQEIEEKILPQPTTKAKERLWSKQVRSKKKKKEAYLTAEELL
ASKQDQALEVVQKVFDMRGPQVRVLTNLENLNAEEKAREKDIPMPELQHNVRLIVDLAEL
DIQKIDRDLRNEKETALVLQEEKEKLEIELARQKKQLDNMEEIMNTIERIGEDNSAGTLT
LDGLAKCFSGLQRKFGDNYKLCNLSCIACSLALPLFIRVFQGWDPLQNPSHGSEVISLWK
TLLQDEDCIDIWDVTSPYTLLVSELVLPAVRISGINTWQARDPEPMLRFLEYWEKLLPPS
VLHTILDNVVMPKLASAVDMWEPQRDPVPIHMWVHPWLPLLGGKLEGMYQVIRTKLSFVL
GAWHPSDASAYTILSPWKPVFDSASWEQLVLRFIVPKLQLVLQEFQVNPGNQKLDQFYWV
TSWASAIPIHIMVDMMEKFFFSKWLQVLYHWLCSKPNFEEVTKWYMGWKELFPKELLANE
SIRYQLSCGLDMMNQAVEGMEVVQPGSKENNSYHRIPEQRQFEAQQKVASQAKQQGADGL
GNASHLDGMGGTLEMTLKEVLEAHAQQHGLLFKPKPGRMHNGHQIYGFGNISIIVDTLNQ
KVYAQTEESWSLVSLERLLDMHNSSTARRW
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggatgattatcaggagatggagaggtttggtatggagaatgattacgatgatgggcaa
tggattggcggcgagttttattatcgaaaacgcaaagagaagaggtcccaaacgaaagac
gatgttctctatggtgtctttgcgactgggtcggattcggactctgatggattttcgtct
cggaagcgccgcaaggaccgcgacttgtctaggaaacctgacctcaccaagcctgtcaat
tttgtatccaccggcaccgtcatgcccgatcaggagatcgataagatttccaaggatggt
gatactgacaatgcggatgatgaccggcctggccttggcttgggttccagcacttctggt
tctggtttggggtttacttcgtcgagttccgatagaaaccgtaatggggttaaggagaat
ggttctactggtgatggagatgaagatggtgatgacttatttttgctcactgcgtttggg
aggaggattaaggagggagctgaaaggagggagagggaaagagtgaagtctcaggtagag
aagaaaagtcgagcggtagccgggacgagaaaagattctaaccttgggaatgttggagtg
tttgagaagcataccaagggcatcggcctgaagctacttgaaaagatgggatacaaggga
ggtgggcttggcagaaacgaacaagggattgtagctcccattgaagctaaaatgaggcct
aagaatatgggtatgggttttaatgacttccaagaggcgcctaagatacctgttttacaa
gaaatagaggagaaaatattgccccaaccaacaaccaaggcaaaggagaggctatggtcg
aagcaagtaaggtctaagaagaagaagaaagaagcatatttaacagctgaggaattactg
gctagcaagcaggaccaggcattggaggttgttcaaaaggtgtttgatatgcgtgggcct
caggttcgggtattgacaaatttagaaaacttgaatgctgaggagaaagccagagaaaag
gacatccctatgccagagcttcagcataatgtgaggttgattgtagacttggctgagttg
gatattcaaaaaattgatagggatttgagaaatgagaaggaaaccgcgctcgtcttacag
gaagagaaggaaaagttagagatcgagctggctcgtcagaagaagcagttggataatatg
gaagaaattatgaacacgatagagcgaataggagaagataattctgctggaacattgacg
ttagatggacttgccaagtgcttcagtggcttgcagagaaaatttggtgataactacaag
ttatgtaacttgtcttgcattgcatgttcacttgcactacctttgttcattagagtattt
cagggctgggatcccctacaaaatccttctcatgggtcagaagtgatatcattgtggaag
actctgcttcaagatgaagattgtatcgacatctgggatgtgacatcgccttatactctc
ctggtttcagaacttgtcctacctgcagtaagaatttctggcataaatacttggcaggcc
agggatcctgaaccaatgcttcgattcttggagtattgggaaaaattgctgcctccttca
gtccttcataccatattggacaatgttgtcatgcctaaactggcaagtgcagttgatatg
tgggaacctcagcgcgatcccgttcctatccacatgtgggtacatccatggctgccattg
ttagggggtaagctggagggtatgtatcaggtcatacgtacgaagttgagttttgttctt
ggtgcttggcacccaagtgatgcttctgcctatactatattgtccccgtggaaacctgta
tttgattctgctagttgggagcagcttgtgcttcgatttatagtacctaaactacagctt
gtcttgcaagaattccaagtaaatcccggaaatcagaaacttgatcagttttactgggtt
actagttgggcttctgccatacctatccacatcatggttgatatgatggagaaattcttc
ttctccaagtggctacaggtattgtatcactggttatgttcaaaaccaaattttgaggag
gttacgaagtggtacatgggttggaaagaactctttccaaaggagcttctggctaatgaa
agtatccggtaccagcttagttgtggcctggatatgatgaatcaagctgttgaagggatg
gaggtggttcagccaggttcgaaagaaaataattcttaccaccggattcctgagcagcgg
cagtttgaagctcagcagaaagttgcttcgcaagctaaacaacaaggtgcagatggcttg
ggtaatgcttctcatttggatggtatgggtggtacacttgagatgactctgaaggaagtg
cttgaggcccatgcccaacagcatggtttgctctttaagcctaaacctggaaggatgcac
aatgggcaccagatatatggctttggaaatataagcataatagtggacactctaaatcaa
aaagtgtacgcccaaactgaagaatcgtggtccctagtatcccttgaacgattgctcgac
atgcacaatagttctacagcaaggagatggtag
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