Cucurbita pepo subsp. pepo (vegetable marrow): 111795198
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Entry
111795198 CDS
T05351
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3-like isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111795198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111795198
Enzymes [BR:
cpep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
111795198
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
HECT type E3
111795198
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
ARM_ARMC5
Arm
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
111795198
NCBI-ProteinID:
XP_023533255
LinkDB
All DBs
Position
LG05:complement(9662531..9683817)
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AA seq
1884 aa
AA seq
DB search
METRSRKRAEASSAAPSSSSSGPTTRSTKRARLSGTSSLNLAAPTLSISTRSRSTRTQEP
SATSTPMDSTNESSGSRRRGKNSDKENSDKGKEKEHEVRIGDREKNAEQSFGLNIEGSGG
GEDDDNDSEGGMGVLQHNLSTASSALQGLLRKLGAGLDDLLPSSAIASASSSQQRGRLKK
ILSGLRADGEEGRQVEALTQLCEMLSIGTEESLSTFSVDSFVPVLVGLLNHESNPDIMLL
AARALTHLCDVLPSSCAAVVHYGAVSCFCARLLTIEYMDLAEQSLQALKKISQEHPTACL
RAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQYHDAKV
LEHASVCLTRIAEAFASSPDKLDELCNHGLVTQAASLISTSSTGGGQSSLSSATYTGLIR
LLSTCASGSALGAKTLLLLGISGILKDILSGSGVSTNSPALNRPQEQIFEIVNLANELLP
PLPQGTITFPPNFNSFVKGPVVKKPSTSGSVKDEDPTAGAPEVSAREKLLKDQPELLHQF
GMDLLPILIQIYGSSVNGPVRHKCLSGIGKLMYFSTPEMIQSLLNVTNIASFLAGVLAWK
DPHILIPALQIAEILMEKLPETFSKMFLREGVVYAVDQLILADNQNSASQAASVEKNNNS
ASGTSSRTRRYRRRSGNMNLDGSSLDENKNPVSGSGVPQGSVEAPSVNSNLRTAVSAYAN
AFKTKYFPLDPGDVEVGVTDDLLRLKNLCVKLSTGIDDQKTKSKGKSKASGSRQDDIITN
KEECLTGVISEMLIELGKDDGVSTFEFIGSGVVGVLLNYFSCGYFSKGRISEAELPKLRR
QVLKRFKSFISVALPTSINVGTVAPMTVLVQKLQSALSSLERFPVVLSHSSRSSNGSARL
SSGLSVLSQPFKLRLCRAQGEKSLRDYSSNIVLIDPLASLAAVEEFLWPRVQRSESGQKP
SASSAANSDSGTTPTGTVASTPSSTTRRTVASTPSSTTRRYPTRHRWSMTIGERAGKESS
QEKNTSKGKGKAILKPAWEEKRGLQTRNSTRRRSAVNKDAQMKPANGETTSEDEELDLSS
IQIDDSLVIEDDDISDDEDDDQDDVLQDDSLPVCMPEKVHDVKLGDAVEDGDAGPATSDS
QIHSAFGSVSRAAAVRGSRGGISNSEGSRGGMSFAAAAMAGLGSANGRAFHGSRDQQGRP
LFGGSNDDPKLVFSSGEKQLDRHLTIYQAVQRQLVLNEDDDERFAGTGSDFLSNDGSGLW
GDIYTITYQRSDNQCERALAGESSSSKSKSTKCVSTSSSNSESQFHQMSLLDSILQGKLP
CDLDKSNPTYDILSLLHVLEGLNQLAPRLRAQIVSDHFAEGKISTLNELGGIGGKVPHEE
FINSKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLFPFETRRQYFFSTAFGLSRAL
YRLHQQQGADGQGTVNEREVRVGRLQRQKVRVSRNRILDSAAKVMEMYSSQKAVLEVEYF
GEVGTGLGPTLEFYTLLSHELQRAGLGMWRSNSLQESIESSEDEQLGKAKDANTDIIQSP
LGLFPRPWPPNANSSEGSQFSKVIEYFRLVGRAMAKGLQDGRLLDLPLSTAFYKLVLGQD
LDLHDVLSFDPELGKNLQELQALVRRKHLLESTNGDNENTISNLSFRGVAVEDLSLDFTL
PGYPDYVLKPGDETVNIHNLEEYISLVLDATVKTGIMRQMEAFTAGFNQVFDISALRIFI
PHELDHLLCGRRELWKADTLADHIKFDHGYTAKSPAIVNFLEIMGEFTPEQQRAFCQFVT
GAPRLPPGGLAVLNPKLTIVRKHSSTATNAATGGVGASESADDDLPSVMTCANYLKLPPY
STKEIMYKKLIYAINEGQGSFDLS
NT seq
5655 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcggagcagaaagcgggcggaggcctcctcagcagccccttcttcttcgtct
tctggtcctactactcgttctaccaagcgcgctcgtctctctggtacttcctcattgaat
cttgctgcacctactctttcgatctcaacgcgttctcgctctactcgaacccaagaaccg
tctgccaccagtactccaatggactccaccaatgaatcatcggggtcacgccgtcgaggg
aagaactctgataaagaaaattcggataagggaaaggagaaagaacacgaggttagaatt
ggggatagagaaaaaaatgcggagcaaagctttgggcttaatattgaaggcagtggcggt
ggagaggatgacgataacgacagtgaaggagggatgggagtcttgcagcataatttatcc
acggcaagtagcgcccttcaaggacttttgaggaaactcggtgctggactggatgattta
cttccttcttctgcaattgcatcggcttcttcctcacagcagagaggacggcttaagaag
atcttgtctgggttgagagcggatggagaagaagggaggcaagttgaggcattgacacaa
ctttgtgagatgctctcaatcggcaccgaggaatctctaagtaccttctctgtagattcc
tttgtccctgtccttgtcgggttacttaatcacgaaagcaatccagatataatgcttcta
gcggccagggcactaacccatctgtgtgatgtcctgccttcatcatgtgctgctgtcgtt
cattatggtgctgtttcctgcttctgtgcgagattgctaactatagaatacatggactta
gctgaacagtccctgcaagctttgaagaagatatcccaggaacaccctactgcctgcctg
cgtgctggtgctcttatggctgtgctttcatatttagatttcttctccacaggagttcag
cgagtcgcattgtcaactgctgctaatatgtgcaagaagcttccttcagatgcagccgac
tttgtgatggaagctgttcccctgctaaccaaccttcttcagtatcatgatgcaaaggtg
ttggagcatgcttctgtttgtttgactcgtattgctgaggcctttgcatcatctccagat
aaattagatgaactatgtaatcatggacttgttacgcaagctgcctcacttatttccact
agtagcaccggaggtggacagtcaagtctcagctcagctacttatactggattaatccga
cttctttccacttgtgcaagtgggtctgccttaggtgcaaaaactttgctgcttcttggg
atcagtgggattcttaaagatatactgtctggttctggtgtgtctaccaattcacctgca
ttaaatagaccacaagagcagatttttgagatagtcaacttggcaaatgagcttctaccc
cctctgcctcaaggaaccattacttttccgcccaactttaattcgtttgtgaaaggacct
gtcgtcaagaagccttctactagtggttctgtgaaagatgaagatccaactgctggtgcc
cctgaggtttcagctcgtgagaaactcttaaaggatcagcccgagctcctacatcagttt
ggaatggatctccttcctattttaatacagatctatgggtccagtgtgaatggtccagta
cgtcataaatgtctctcaggaattggaaaattgatgtatttcagcactccagagatgata
caatcgctattgaatgtgactaatatagcaagttttctagctggtgttttggcgtggaaa
gatccacacatattgattcctgctctccaaattgctgagattcttatggaaaagcttcct
gaaacattttccaagatgtttcttcgagagggtgttgtttatgctgttgaccagcttatc
ttagccgataaccaaaattctgcttcccaagctgcttccgttgagaagaataacaactct
gcatctggaacttcatcacgcactcgacgttatagaaggcgcagtggaaatatgaatctg
gatggaagttcactggatgaaaacaagaatcctgtttctggtagtggtgttccacagggt
tcagtggaggctccatcagttaattctaatctccgaactgctgtgagtgcctatgccaat
gcttttaaaaccaagtacttccctttagatccgggagatgttgaagttggagttacggat
gatctcttacgtctgaaaaatctgtgtgtcaagttgagtactggtattgatgatcagaag
actaaatcaaaagggaagtcaaaagcttcagggtctcgccaagatgatattattactaat
aaggaagagtgtttaactggtgtaatatctgaaatgctaattgaattgggaaaagatgat
ggtgtttccacatttgaatttattggtagtggcgttgttggagttctgcttaactacttt
tcctgtggatacttctctaaaggaagaatttcggaagctgagttgcccaagcttcggcga
caagtacttaaaagatttaaatcatttatttctgttgcccttcctacaagcattaatgtg
ggaacagtagctcctatgacagtcttagttcaaaagctacagagtgctttgtcctctttg
gagcgttttcccgttgtcttgagccattcttctagatcatccaatggtagtgcacgtctt
tcctctgggctaagtgtattatctcagccatttaagttacgactgtgtcgagcccaagga
gaaaaatcacttcgtgattattcatcaaatattgttctgattgatccattggcaagttta
gcagctgtagaagaatttctgtggcctagagttcagagaagtgaatctggtcaaaaacct
tcagcatcatctgctgcaaactcggattcaggaacaaccccgacaggaactgttgcttca
actcctagttcaaccactcgccgaactgttgcttcaactcctagttcaaccactcgccgt
taccctactaggcacagatggtcgatgactattggagaaagagcagggaaggaatcttca
caggagaaaaacacttcaaaggggaaggggaaagctattctaaagcctgcttgggaggag
aagagaggcctacaaactagaaattctacccgtagaagatcagctgtgaacaaggatgcc
caaatgaagcctgcaaatggagagaccacttctgaggatgaagaattggacctgtcctcc
atccagattgatgattctttagtgattgaggatgatgatatttctgatgatgaagatgat
gaccaagatgatgtgctgcaggatgactctcttcctgtttgtatgcctgaaaaggtgcat
gatgtcaaattgggtgacgcagttgaagatggtgatgctggtccagctacaagtgatagc
cagattcattcagcttttggctctgtcagtagagcggctgcagtcaggggttcaagggga
ggtatttcaaattcagagggttcaaggggaggtatgtcatttgctgctgctgctatggct
gggcttggatcagctaatggcagggctttccatggaagtcgggatcaacagggacgtcct
ctctttggtggctccaatgatgacccaaaattagtcttttcttctggtgagaagcagctt
gatagacatttgacaatataccaagctgttcaacggcagcttgtattgaacgaggatgat
gatgagaggtttgctggtactggcagtgacttcttatctaatgatgggagcggtttatgg
ggtgatatatataccatcacatatcagaggtcagataatcaatgcgagagggctttagct
ggggaatcaagctcctctaaatctaaatctaccaaatgtgtatcaacttccagttcaaat
tcagagtctcagttccatcaaatgtcacttctagacagtattttacaaggaaaacttcca
tgtgatttggacaaatctaatcctacatatgatatattatctttactgcatgtactggag
ggattgaatcagcttgctccacgcttaagggcacaaatagtctctgatcattttgcagag
ggaaagatctctacacttaatgagttgggtggaattggtggaaaggttcctcatgaggaa
ttcatcaatagtaagcttactcccaaattggctcgacaaattcaggatgctcttgcatta
tgcagtgggagcctcccttcgtggtgttaccaattgactaaggcatgtccattcttgttt
ccttttgagacccggcgacagtatttcttttcaactgcatttgggctgtcacgtgcatta
tatcgtctacatcagcaacaaggagctgatggtcaaggaacagtaaatgagcgagaggta
agggttggaagattgcagcgccaaaaagttcgtgtctcacgtaatcgaatattggattct
gctgcaaaagttatggagatgtattctagccaaaaggccgtccttgaagtagaatatttt
ggcgaagtgggaactggattaggtcctacccttgaattctacacacttttaagtcatgag
ttgcagagggctggacttgggatgtggaggtctaattctttacaagagtcgatcgaaagt
agtgaagatgagcagcttggaaaggctaaagatgccaatactgatatcatccaatctcct
cttgggttattcccacgaccttggccaccaaatgccaattcttccgagggcagccaattt
tcgaaggttattgaatatttccggcttgttggtcgtgcgatggccaaaggtctgcaagat
ggaagactattggatctaccactctcaacagcattttataagcttgttcttggtcaagat
cttgatttacatgatgtcctctcatttgaccctgagctagggaagaatttacaagaattg
caggctcttgttcgtcggaaacatcttttagaatcgaccaatggtgataatgaaaataca
atttccaacttgtccttccgcggggttgcagtagaagatctctccttggattttacacta
cctggttatccggactatgttttgaagccaggagatgaaactgttaatattcacaacttg
gaggaatacatatcccttgtattagatgccactgttaagactggcataatgcgacaaatg
gaagcatttactgcaggattcaatcaggtttttgacatatcggcattacgcatatttatt
ccccacgagttggaccatttgctatgtggtcgtagagaattgtggaaggctgacactctt
gccgatcatattaaattcgatcatggatacaccgccaagagtcctgcaatagtcaatttt
ctcgagattatgggcgaattcacaccagagcagcagcgagctttctgccagttcgtaaca
ggtgcacctaggcttccaccaggaggccttgcagtgttgaacccaaaattgactattgtg
agaaagcactcgtcaacagcgactaatgcagccaccggcggggtaggggcttccgaatca
gcagatgacgatttgcctagtgttatgacgtgcgccaattaccttaagcttcctccatac
tcaaccaaggaaataatgtacaagaaactaatctacgcgatcaacgaggggcagggatct
ttcgatttgtcatga
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integrated database retrieval system
