KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111795236
Entry
111795236         CDS       T05351                                 
Name
(RefSeq) UBP1-associated protein 2A-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111795236
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpep03019]
    111795236
   03041 Spliceosome [BR:cpep03041]
    111795236
Messenger RNA biogenesis [BR:cpep03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     111795236
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     111795236
Spliceosome [BR:cpep03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    111795236
SSDB
Motif
Pfam: RRM_1 RRM_7 Cut8 BUD22 CENP-B_dimeris BSP_II
Other DBs
NCBI-GeneID: 111795236
NCBI-ProteinID: XP_023533302
LinkDB
Position
LG05:complement(7218091..7222671)
AA seq 495 aa
MARKRKLDSSKSSEPAEPPKKLQQQAQAELDENKPQDEPVKDVVHEDLAEYEVVEEEDDG
DQDENEEDDDDEEEEEEEEDEGDETTVDNHHQTPIVSTSSAAATTTATAAAADDDDEPIQ
KLLEPFSKDQLINLLREAAEKHADVDGRIRMVADADPSHRKIFVHGLGWDTNTETLNNVF
KQYGEIEDSKAVCDKVSGKSKGYGFILFKKRSGARKALKEPQKKIGNRMTACQLASVGPV
PSSSAAVVTPQAPPASEYTQRKIYVSNVGADVDPQKLLTFFSQFGEVDEGPLGLDKVTGK
PKGFCLFVYKTIESAKRALEEPHKNFEGHMLHCQRAIDGPKPGKSQHQHHVQNAPFQRNK
NPNYAGGAASGSGHLMAPAGPGVGYNQGPPQALNPALGQALTALLASQGAGLGLTNLLGT
LGSAAGLNPAVQGGGPGVQSGYGSQANISPGVIGYGSQSGVQGGYPNQQMGQGGTVRGGQ
HGVGQYGGPGGYMGH
NT seq 1488 nt   +upstreamnt  +downstreamnt
atggctagaaagcgaaagctcgactcctccaaatcctccgagcctgccgagcctcccaaa
aagctccaacagcaagctcaagctgaactcgacgagaacaagccccaagatgaacccgtt
aaggacgtcgttcatgaggatctagcggaatacgaagtggtcgaggaagaagatgatggc
gatcaagatgaaaacgaggaggatgatgatgacgaggaggaggaggaggaggaggaagat
gaaggcgatgagactactgtcgataaccaccatcagacccctattgtttcaacctcctca
gctgctgctacaactactgctactgctgctgctgctgacgacgacgatgagcccattcaa
aagctcttggagcctttcagcaaggaccagcttataaatctgctgcgtgaagcggctgag
aagcacgcggatgtggatggaagaattcgaatggttgctgatgcggacccatcccaccgc
aagatttttgttcacgggctcggatgggataccaatacggaaactttgaacaacgtgttt
aagcaatatggggagattgaggactccaaagctgtgtgtgataaggtctctgggaagtcc
aagggttacggtttcatcctcttcaagaagcgtagtggggctcgaaaagcactgaaggaa
ccccagaagaagattggcaataggatgactgcctgtcagttggcttcggttgggcctgtt
ccatcgtcgagtgcggcggtagtaacccctcaagcaccacctgcttcggaatatactcag
aggaagatttatgtgagcaatgttggagctgatgtagacccccagaagttgctaactttc
ttttcccagttcggtgaagttgatgaaggaccattggggcttgacaaggtgacaggcaag
cctaaaggtttctgtctatttgtgtacaagacgatagaaagtgctaagagggctttggag
gagccccacaagaactttgagggtcatatgttgcattgccagagggccatcgacggtccc
aagccagggaagtctcagcaccagcatcatgtacaaaatgctccgtttcagaggaataag
aatccgaattatgcaggtggggcggcatctggatcagggcacctgatggcacctgcaggg
cctggtgttggttacaaccaaggacctcctcaagcattgaacccagctcttggccaggcc
ctgactgctttgctggcgagtcagggtgctgggttaggactaactaatttgttagggacg
ctcggatctgctgcagggctgaatccagctgtgcaaggcggcggacctggagtacaaagt
gggtatggtagtcaagcaaatataagtcctggtgtaattggatatggaagtcaaagcggt
gtgcagggtggatatccaaaccaacagatgggacagggtggaaccgtaaggggagggcag
catggagttggacagtatggtggtcctggcggttatatggggcactag

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