Cucurbita pepo subsp. pepo (vegetable marrow): 111795253
Help
Entry
111795253 CDS
T05351
Name
(RefSeq) H/ACA ribonucleoprotein complex non-core subunit NAF1
KO
K14763
H/ACA ribonucleoprotein complex non-core subunit NAF1
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpep03009
]
111795253
Ribosome biogenesis [BR:
cpep03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
111795253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gar1
Motif
Other DBs
NCBI-GeneID:
111795253
NCBI-ProteinID:
XP_023533326
LinkDB
All DBs
Position
LG05:complement(10241515..10244181)
Genome browser
AA seq
688 aa
AA seq
DB search
MVELSSNSTTASAPDGLLHASSKLKNSEPLPLDSFDSKPVDYSFADSFLDYDSLTDWIDE
FTSPVMADAQTILPEAESHVNQLVEKSVPIVGEIQPIAQAEGEACGKSTDLNCIIEEGMS
KVSLVIDGGSTGNIESDSREDDDDSDVESEGTSSASTSSDSSSSSGSSDDEKDEEESSSS
SSSGDSSCDDDVETEENSVKADVHTEIGELEEGEISDADNEDKEASADDMVAWDGDGEEL
DEEEEAGPEGGPISSKNELKVLPPVPQVHATLQPHHQMVPVGVVLSIIGSQVIVEGVEKH
NPLNEGSILWLTVARSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGISSGTHVSFVLEFA
DYVLNNKDLYKKGYDASGANDEEVSDNEFSDDEKELEFKKMQKLAKRGMNDNQQINENRN
NARKKKNNAKARKFGQRTFETPQEHDKSRNYGQAIPQQATVPEGSKFDQPAPQQVKMDMA
HSFSNQNQHTGPPLAPFVYHGGYPNPSASEQRFINGPGVMPSFPPAFNPCFPPAMNGIRP
AEMPFQFQQQQQQQNPLFPNGLPMTGMPWLLQNPVQQVPQPQMPMMNTFAGAPYPPGFVG
TSSALPNPLTAVGAQGIHSGGVQFGQNQNMHPPTQQFNRPNPHPPVPFQGNVAPEQFNQG
SSSNRGRKSYGRGGPHFRGRRGGGRQPR
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggtagagctttcatccaactccaccactgcgtctgcgcctgacggcctccttcacgct
tcttctaagcttaagaactcggagccgcttccgcttgactcttttgattccaagcccgtc
gattactcctttgccgattccttccttgattacgattccttaaccgactggattgacgaa
tttacatctcctgttatggctgatgcacaaacgattcttcctgaagcggaatcccatgtg
aatcaactagtcgaaaagtctgttccaattgttggtgaaattcagccgattgcgcaggcg
gaaggtgaggcttgtggtaagtctacggatttgaattgcatcattgaggaagggatgtcg
aaggttagtttggttattgatggaggaagcactgggaacattgagtcggattctcgagag
gatgatgatgacagtgacgttgagtccgagggcacaagttcagcttcaacgtctagtgat
agtagtagctctagcggaagcagcgatgatgaaaaagatgaggaagaaagttcatcgtct
tcaagtagcggcgacagcagctgcgatgatgatgtagagacggaggagaactctgtaaaa
gcggatgtacacacagaaatcggtgaacttgaagaaggtgagataagtgacgctgacaat
gaagacaaggaggcctctgcagatgacatggttgcgtgggatggtgatggtgaggaacta
gacgaagaagaagaggctggacctgagggaggtccgattagttctaaaaacgagcttaag
gttcttcctccagttcctcaggtgcatgcaacgctgcagccacaccaccagatggtacct
gtcggagttgttttgtccataattggcagtcaagtcattgtagagggtgttgagaagcac
aatcctctaaacgaaggctctatcctgtggctaactgtagctagatccccattggggttg
gtagacgagatctttggaccagtaaaaaatccttattattcagtaagatacaattctgaa
agtgaagtccctactggaataagtagtggcactcacgtctcctttgttctggagtttgcc
gattatgtgctcaacaacaaagacctgtacaagaaggggtatgatgcatctggagcgaat
gatgaagaggtgtccgacaacgagttttcagatgatgagaaagagcttgagttcaagaag
atgcaaaagctggctaagaggggtatgaatgacaaccaacagattaatgagaacagaaat
aatgctaggaagaagaaaaacaatgctaaagccaggaaatttggtcagcggacatttgag
acaccgcaggaacatgacaagtccaggaattacggccaggccataccccagcaagcaaca
gttcctgaaggcagcaagtttgatcagccagcacctcagcaagtaaagatggatatggct
cactcattctccaatcagaatcagcacactggccctcctttggcgccgtttgtatatcac
ggtggttatccaaacccttcagcttctgaacaacgttttatcaatggacctggtgttatg
ccatcatttcctccagcgttcaacccctgctttcccccagcaatgaacggaattaggcca
gcagaaatgccatttcagtttcagcagcagcagcagcagcagaatccattatttcccaac
ggtcttccaatgactggcatgccctggctattacagaatccggtacagcaggtgcctcag
cctcaaatgcctatgatgaatacatttgctggagctccatatccgccggggtttgtaggt
acatcatccgccctacctaatcccctcacagccgttggggcacaaggaatccattccggt
ggagtacagtttggacagaatcaaaacatgcaccctccaacacagcaattcaatcgtcca
aacccgcacccacctgtaccattccaaggaaatgtagcaccagagcaattcaaccaaggc
tcatcttcgaaccggggaaggaaatcgtatggtcgaggtggacctcattttagaggtaga
agaggaggtgggcgtcaaccaagatga
DBGET
integrated database retrieval system
