Cucurbita pepo subsp. pepo (vegetable marrow): 111795287
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Entry
111795287 CDS
T05351
Name
(RefSeq) ras-related protein RABH1b
KO
K07893
Ras-related protein Rab-6A/C/D [EC:
3.6.5.2
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111795287
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpep04147
]
111795287
04031 GTP-binding proteins [BR:
cpep04031
]
111795287
Enzymes [BR:
cpep01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.2 small monomeric GTPase
111795287
Membrane trafficking [BR:
cpep04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab GTPases
111795287
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
111795287
Exosome [BR:
cpep04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
111795287
Exosomal proteins of bladder cancer cells
111795287
GTP-binding proteins [BR:
cpep04031
]
Small (monomeric) G-proteins
Rab Family
Rab6/41 [OT]
111795287
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
SRPRB
Gtr1_RagA
RsgA_GTPase
MMR_HSR1
FeoB_N
ATP_bind_1
AAA_7
TIR_2
Motif
Other DBs
NCBI-GeneID:
111795287
NCBI-ProteinID:
XP_023533385
LinkDB
All DBs
Position
LG05:complement(1115137..1123615)
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AA seq
208 aa
AA seq
DB search
MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFVNTSKWIEEVRTERGSDVIIVLV
GNKTDLVEKRQVSVEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK
QEDMVDVNLKSSGSGAAQSQPQSGGCAC
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgacgtcagctctggcgaagtacaagctggtctttctcggagaccagtctgtt
ggaaaaaccagtatcattacacgcttcatgtacgacaaattcgataatacgtatcaggct
acaattggtatcgattttctctcaaaaactatgtatcttgaagatcgcactgttcgactg
cagttgtgggacactgctggacaggaaagattcagaagtttaataccaagctatatcagg
gactcgtctgtcgcggtcatcgtttatgatgttgcaagccggcagactttcgtaaacact
tcgaaatggattgaggaggtgcgcactgagaggggcagtgatgttattatagtgcttgtt
gggaacaaaacggaccttgtggagaagaggcaagtctccgtagaggaaggagaagccaaa
gcccgtgaactaaatgtcatgtttatcgaaacaagtgcaaaagctggattcaatatcaag
gcactattccgaaaaattgctgcagcattgcccggaatggaaactctctcttcgacaaag
caagaggacatggttgatgtcaacctgaagtcatcaggcagtggtgctgcacaatcccag
ccgcagtccggtggatgcgcctgctag
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