Cucurbita pepo subsp. pepo (vegetable marrow): 111795422
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Entry
111795422 CDS
T05351
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4-like
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111795422
Enzymes [BR:
cpep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111795422
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111795422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-RING_10
zf-C3HC4_4
Prok-RING_4
zf-rbx1
TRAF3_RING
Rtf2
zf-RING_4
zf-Nse
Tudor_KDM3B
Sina_RING
zf-ANAPC11
VpsT-like_REC
Zn_ribbon_HMPTM
zf-RING_11
Zn_ribbon_RlmA
Motif
Other DBs
NCBI-GeneID:
111795422
NCBI-ProteinID:
XP_023533606
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All DBs
Position
LG05:644059..648061
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AA seq
207 aa
AA seq
DB search
MSTQAMRGGHTTRGYHRRKSLDLDLNIMPPTENRDQGEASQLVFQEAQVNQQQSVQPAMI
DVEAIDDDVIESSATAFAEAKNKSRRNARKIIVDVDAEEWSRVSNNNRIKRKRDVSNQQT
LNSVLLINLEGSNSFMKEKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIAV
QSKCPSCRKRVTAKELIRVFLPGTRLE
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgagtactcaggcaatgagggggggacataccacaagaggttatcatcgtaggaaatca
ttggacttggacctcaacatcatgccaccaaccgagaaccgagatcaaggggaggcatct
caattggtgtttcaggaagcacaagttaatcaacaacagtccgtacaacctgcaatgatt
gatgttgaggccattgatgatgatgttattgaatcatccgccacagcatttgctgaagct
aaaaataaatccagacggaatgctaggaagattatagttgatgtggatgcagaagagtgg
agccgggtgtcaaataataaccgcatcaagcgtaagagagacgtgtcaaatcaacaaact
ctaaattccgttttattgatcaatttggaaggcagcaatagctttatgaaagagaagcct
gctccaccgaaggagcccaaattcagttgtccaatatgcatgggtccgttagtagaagaa
acgtcaacaaggtgtggtcatattttctgcaagtcatgtatcagggctgcaatagccgtc
cagagcaaatgcccgtcctgtaggaagagagtaactgccaaagaactcatcagagtgttc
cttcctgggacgaggttggagtga
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