Cucurbita pepo subsp. pepo (vegetable marrow): 111795429
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Entry
111795429 CDS
T05351
Name
(RefSeq) ABC transporter B family member 28 isoform X1
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111795429
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpep02000
]
111795429
Transporters [BR:
cpep02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
111795429
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_21
AAA_30
RsgA_GTPase
AAA_16
ABC_ATPase
AAA_5
AAA_29
AAA_15
AAA
AAA_25
AAA_23
AAA_28
AAA_14
Rad17
SRP54
AAA_33
Cytidylate_kin
Motif
Other DBs
NCBI-GeneID:
111795429
NCBI-ProteinID:
XP_023533626
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Position
LG05:complement(4236309..4243451)
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AA seq
707 aa
AA seq
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MSSTALLSLPFTLRPSRFPNSSLSPLRRATSVAPFPTVAAVRCGFKPASKSSRGSSTSFA
YVGPASDPNVSESDPKLDDASDSQVRAPGVLYWGLLWKLLIKHKLRLLVSSLTLVCCTTC
TLSMPFFSGRFFEVLIGAKPGSLWRLLSTVGILYALEPILTVLFVTNMNFMWEKVMSRLR
AQIFGRLLIQKVEFFDRYKVGEITGLLTSDLGSLKDVVSENVSRDRGFRAFSEVIGTICI
LFALSPQLAPILGLLMLSVSFSVAVYKRSTIPVFKAHGLAQASMADCATETFSAIRTVRS
FGGEKRQMFNFGRQVIAYEGSGISLGTFKSLNESLTRVAVYISLMSLYWLGGDKVKAGEL
SVGTMASFIGYTFTLTFAVQGLVNTFGDLRRTFAAVERINTVLHEEVDEALAYGLEKEMQ
QKEFKYKLLFSGDTDENSQVKTQYMSDLKSSSNVINLAWSGDICLEDVGFSYPLRPDVDI
LSDLNLTLKCGTVTALVGPSGAGKSTIVQLLARFYEPKQGQIKVSGEDIRAFDKREWARA
VSIVNQEPVLFSVSVGENIAYGLPDDNVTKDEVIKAARAANAHDFIIALPQGYDTPVGER
GGLLSGGQRQRIAIARALLKNAPILILDEATSALDAVSERLVQDALNLLMKGRTTLVIAH
RLSTVQNAHQIAFCSDGKIVELGTHLELLAQKGQYASLVGTQRLAFE
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaccgcccttctctctctccccttcactctcaggccctctcgcttccccaat
tcctctctctcgccgctccgccgtgccacctctgtcgcgccatttccaacagttgcggcg
gttcgctgcgggtttaagcctgcttccaagagtagcagaggcagttctacttctttcgcc
tatgtcgggcctgcttcggacccgaatgtcagcgagtccgacccgaaactcgatgacgcc
tccgattcccaggttcgggctcctggggtcttgtattgggggctcttgtggaagcttttg
attaagcacaagctacggcttctggtttcttcgcttactcttgtttgctgcaccacttgc
actctttccatgccgtttttctcaggtagattttttgaggtacttataggtgcaaaacct
gggtctttgtggaggctgctgagtacagttggaattttatatgcattggagccaatattg
acggtcttgttcgtcacaaacatgaatttcatgtgggagaaggttatgtcaagattaaga
gcccagatttttggaaggttgctgattcagaaggtggaattttttgacagatacaaggtt
ggtgaaattaccggattgttaacttctgatttgggctctcttaaagatgtggtgagtgag
aatgtttcaagggaccgtggattcagagcgttctctgaggtgattggaacaatatgtata
ttatttgcattgtccccccagcttgcacctattcttggtcttctgatgttgagtgtatct
ttttcagtggctgtatacaagcgttctactatccctgtatttaaagctcatggattagct
caagcctccatggctgattgtgcaacagagacattctctgctattcgcactgtgagatcc
tttggtggtgaaaagcgtcaaatgttcaattttggtcgccaggttattgcatatgagggt
agtggcatatcacttgggacttttaagtctctgaatgaatccttaactagagttgctgtt
tatatttcgcttatgtcattatattggcttggaggagacaaagtgaaagcgggtgaactt
tctgtaggaaccatggcttcttttattggatatactttcacgttaacatttgctgttcaa
ggattggtaaatacatttggagatctccgtcgaacttttgctgctgttgaaagaattaat
actgttttacatgaagaggttgatgaagcccttgcatatggattagaaaaagagatgcaa
caaaaagaatttaaatataagttgttattctctggcgatactgatgaaaatagtcaggtg
aaaacacagtacatgtccgacctaaaatcttctagcaatgttatcaatcttgcttggtct
ggtgatatttgtcttgaagatgtgggcttttcgtatcctttgagacctgacgttgacatt
cttagtgatttgaatttaacacttaaatgtggaaccgtgacggcactagtgggccctagt
ggagcaggaaagagtacaatagtacagctgttggcacgtttttatgagccaaagcaaggg
caaataaaagtttctggtgaagatattcgtgcatttgataagagggaatgggctcgggct
gtttcaatagtgaatcaagaacctgttctgttttcggtgtctgttggagaaaatattgca
tatggacttccagatgataatgtaacaaaggatgaggtgataaaggcagccagagctgca
aatgctcatgacttcattattgcacttcctcagggctatgacacgccagtcggtgaacgt
ggaggccttctaagtggtggccagcgacagagaatagccattgcaagagctttgcttaag
aatgctccaatccttatacttgatgaggcaaccagtgcactggatgcggttagcgagcga
ctcgtccaggatgctctaaacctcttaatgaagggaaggacgacattggtgattgcacat
cggttgagtacagttcaaaatgctcatcaaattgcattttgttctgatggaaaaattgta
gagctgggtactcatttggaactattggctcagaaaggtcagtatgcttcattagttggc
acacaaaggctggcatttgagtga
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