KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111795462
Entry
111795462         CDS       T05351                                 
Name
(RefSeq) WD repeat-containing protein 70
  KO
K24752  WD repeat-containing protein 70
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cpep04121]
    111795462
   03036 Chromosome and associated proteins [BR:cpep03036]
    111795462
   03400 DNA repair and recombination proteins [BR:cpep03400]
    111795462
Ubiquitin system [BR:cpep04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     111795462
Chromosome and associated proteins [BR:cpep03036]
 Eukaryotic type
  Histone modification proteins
   Other histone modification proteins
    111795462
DNA repair and recombination proteins [BR:cpep03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   Other DSBR factors
    Others
     111795462
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WDR55 Beta-prop_Aladin Beta-prop_RIG_2nd WD40_Gbeta Beta-prop_WDR75_1st Beta-prop_SPT8 DSE1_N Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd eIF2A NBCH_WD40 WDR90_beta-prop_4th CFAP251_N Beta-prop_NOL10_N Beta-prop_WDR19_1st Beta-prop_VPS8 PAC11 ASA1 Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_Nup120_160 WD40_MABP1-WDR62_1st Beta-prop_IP5PC_F Beta-prop_WDR75_2nd
Other DBs
NCBI-GeneID: 111795462
NCBI-ProteinID: XP_023533671
LinkDB
Position
LG05:454123..458634
AA seq 655 aa
MEDEAEIYDGIRAQFPLTFGKQSKAQTSLEAIHNTTRRNTSATVSEKSSSAQDNNGLPSI
SSSSKAWLNSLRTSKNPNTHVSGDSGPSGITRDVDDGPRIGPPRPPTELKLKDDSDDNDD
DDDAMVGPPPPPPRGEGSDDDEDDDGEMIGPPRPPPSSNLDDSDVEEEEYEENRYRIPQS
NEIVLKGHTKVVSALAVDHTGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQIR
NLSWSPSADRFLCVTGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHISGLTCGEWHP
KNKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLARPGRIPVTTCAWDREGKSIVGGMGD
GSIQIWNLKPGWGSRPDIHVESSHSDDITALKFSSDGTILLSRSLDGSLKVWDLRQIKKP
LKVFDDLPNNYAQTNIAFSPDEQLFLTGTSVEKESQTGGLLCLYDRTKLELVSRVGISTT
SVVQCAWHSKLNQIFATTGDKSQGGTHILYDPTLSERGALVCVARAPRKKSVDDFEAKPV
IHNPHALPLFRDAPSRKRQREKILKDPLKSHKPELPITGPGFGGRVGVTQGSLLTQYLMK
QGGMIKETWMEEDPREAILKYADVAAKDPKFIAPAYSHTQPEPVFAKSDSEEEDK
NT seq 1968 nt   +upstreamnt  +downstreamnt
atggaggacgaggcggagatatacgatggcatcagagctcaattccctctcacattcggg
aagcaatcgaaagctcagacctctctcgaagccatccataacaccactcgtcgtaacact
tcagcgactgtttcagaaaaatcttcttccgctcaggataacaatggtctcccttctatc
tcttcctcctccaaagcctggctcaactcacttcgcacttccaaaaaccctaatacacat
gtttcgggcgattctggacctagtgggatcacgcgtgacgttgacgatggtccgaggatt
ggcccgcctcgcccgcccacggagttgaaattgaaggatgacagcgatgacaacgatgat
gatgatgatgcaatggttgggcctccgccgccgccgccgcgtggcgagggttcggatgat
gatgaggatgacgacggggaaatgattggaccaccacgtccaccgccgagctcgaatttg
gatgattcggatgtggaggaggaagaatatgaggagaatcggtatcgaattccgcagagc
aacgagattgtgctcaaaggacatacgaaggtggtttctgctcttgctgttgaccacact
gggtctagagttctttctggtagttatgactatacggtacgtatgtatgactttcaaggg
atgaattctcgtttgcaatccttcagacagctggaaccatttgaaggtcaccaaattcgt
aatcttagctggagcccatctgctgaccgctttttgtgtgtgacgggctcagctcaagcc
aagatttatgaccgtgatggacttactctaggagagtttatgaagggcgatatgtatata
cgtgatctcaagaacactaaagggcacatatctggactgacttgtggagaatggcatcct
aaaaataaagagacgattctgacatcatcagaagatggatccctgcgaatatgggatgta
aatgacttcaaaagtcaaaagcaggttatcaaaccaaagttggctaggccgggaaggatt
ccagtgacgacatgtgcttgggatcgtgaaggaaaaagcatcgtgggtggcatgggtgat
ggttctattcagatatggaaccttaagcctggatggggaagcaggccagacatacacgtt
gaaagtagtcattcggacgatatcactgctcttaagttttcaagtgatgggacaatttta
ctgtcaagaagccttgatggatcactgaaggtttgggatttgcgccagatcaaaaaacct
ctcaaggtgtttgatgatctcccaaataactatgcccaaacaaatattgcatttagtcct
gatgagcaactctttctgactggaacatctgtcgagaaagagagccaaacgggcggtctg
ctctgcttgtatgacaggacaaagctggaacttgtttctagggtaggaatatctactact
agtgttgtgcagtgtgcttggcactcaaagctaaatcagatatttgctactactggagac
aaaagccagggaggaactcacatattgtatgatccaacactaagtgagagaggagctcta
gtttgtgttgcccgtgcaccaaggaaaaaatctgttgatgattttgaggccaaacctgtt
attcacaacccgcatgccctgcctttatttagagacgcaccgagccgaaagcgacagcgt
gagaagatactcaaggacccacttaagtctcataaacccgaactcccgattactggacca
ggcttcggaggaagggttggtgttacccaaggaagcttattaacccagtatcttatgaag
caaggaggcatgattaaggagacatggatggaggaagatccaagagaagccattctgaag
tatgctgatgttgcagcaaaggatccaaagttcattgcacccgcgtattcgcatactcag
cctgaacctgtttttgcgaagtccgattccgaggaggaagataaatga

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