Cucurbita pepo subsp. pepo (vegetable marrow): 111795674
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Entry
111795674 CDS
T05351
Name
(RefSeq) small nuclear ribonucleoprotein SmD1b
KO
K11087
small nuclear ribonucleoprotein D1
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111795674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpep03041
]
111795674
03032 DNA replication proteins [BR:
cpep03032
]
111795674
Spliceosome [BR:
cpep03041
]
Complex A
U1 snRNP components
Sm proteins
111795674
U2 snRNP components
111795674
Complex B
U1 snRNP components
111795674
U4/U6.U5 tri-snRNP components
111795674
Complex C
U2 snRNP components
111795674
DNA replication proteins [BR:
cpep03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
111795674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Gemin7
EBNA2_Core
Motif
Other DBs
NCBI-GeneID:
111795674
NCBI-ProteinID:
XP_023533992
LinkDB
All DBs
Position
LG05:59102..61605
Genome browser
AA seq
114 aa
AA seq
DB search
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSV
RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGRGRGRGRGRGRGRGR
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttgtcaggtttttgatgaagctcaacaatgagacagtttcaatcgagctgaaa
aatggaaccgttgtccatggcaccatcacaggtgtggatatcagcatgaatacacatttg
aaggctgtaaagcttactctaaaggggaaaaatccagttaccatggatcatttaagtgtg
aggggaaacaacatcagatattatattctacctgacagcttgaatcttgagactttactt
gttgaagagacacccagggtcaagcccaagaaaccaactgcagggaagcctttggggcgt
ggacgaggacgaggccgtggtcgtggtcgtggtcgtggacgctag
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